RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C YOR381W-AQ3E804 55 aa4.01□□□□□ -1.77
YPT1YFL038C HHF1P02309 103 aaKnown RBP4□□□□□ -1.77
YPT1YFL038C YMR122CQ03879 124 aa4□□□□□ -1.77
YPT1YFL038C YLR412C-AQ3E742 68 aa4□□□□□ -1.77
YPT1YFL038C HUB1Q6Q546 73 aa4□□□□□ -1.77
YPT1YFL038C YJR128WP47162 119 aa3.99□□□□□ -1.77
YPT1YFL038C YMR001C-AQ8TGS9 76 aa3.99□□□□□ -1.77
YPT1YFL038C YFR032C-BQ8TGU2 87 aa3.97□□□□□ -1.77
YPT1YFL038C YLR255CO13574 117 aa3.96□□□□□ -1.78
YPT1YFL038C YDR010CQ12426 110 aa3.96□□□□□ -1.78
YPT1YFL038C YOR316C-AQ3E806 69 aa3.96□□□□□ -1.78
YPT1YFL038C YGR146C-AQ8TGT9 53 aa3.96□□□□□ -1.78
YPT1YFL038C YBR121C-AP0C5L4 52 aa3.94□□□□□ -1.78
YPT1YFL038C YER188C-AP0C0V2 99 aa3.93□□□□□ -1.78
YPT1YFL038C RPS28BP0C0X0 67 aaKnown RBP3.93□□□□□ -1.78
YPT1YFL038C RPS28AQ3E7X9 67 aaPredicted RBP3.93□□□□□ -1.78
YPT1YFL038C OST5Q92316 86 aa3.93□□□□□ -1.78
YPT1YFL038C COX7P10174 60 aa3.92□□□□□ -1.78
YPT1YFL038C COX8P04039 78 aa3.9□□□□□ -1.79
YPT1YFL038C YBL008W-AQ3E821 79 aa3.87□□□□□ -1.79
YPT1YFL038C YCR095W-AQ3E787 52 aa3.86□□□□□ -1.79
YPT1YFL038C YFL067WP43537 175 aa3.85□□□□□ -1.79
YPT1YFL038C YBR201C-AQ2V2Q3 67 aa3.85□□□□□ -1.79
YPT1YFL038C YBR016WP38216 128 aa3.84□□□□□ -1.79
YPT1YFL038C YNL122CP53921 115 aaPredicted RBP3.84□□□□□ -1.79
YPT1YFL038C YJL144WP47009 104 aa3.81□□□□□ -1.8
YPT1YFL038C MRX7P53869 86 aa3.81□□□□□ -1.8
YPT1YFL038C OLI1P61829 76 aa3.81□□□□□ -1.8
YPT1YFL038C YNL277W-AQ3E7Z0 62 aa3.8□□□□□ -1.8
YPT1YFL038C RPL37BP51402 88 aaKnown RBP3.78□□□□□ -1.8
YPT1YFL038C YIL156W-BQ2V2P4 73 aa3.78□□□□□ -1.8
YPT1YFL038C MDN1Q12019 4910 aaKnown RBP3.78□□□□□ -1.8
YPT1YFL038C ATP17Q06405 101 aa3.77□□□□□ -1.81
YPT1YFL038C FYV12Q08559 129 aa3.73□□□□□ -1.81
YPT1YFL038C CMC4Q3E7A9 73 aa3.69□□□□□ -1.82
YPT1YFL038C YML100W-AQ8TGT0 57 aa3.58□□□□□ -1.84
YPT1YFL038C Q0017Q9ZZX8 53 aa3.56□□□□□ -1.84
YPT1YFL038C YEL014CP39999 101 aa3.55□□□□□ -1.84
YPT1YFL038C YOR394C-AQ8TGJ0 55 aa3.55□□□□□ -1.84
YPT1YFL038C YGL034CP53186 121 aa3.54□□□□□ -1.84
YPT1YFL038C YOR376W-AQ3E805 51 aa3.53□□□□□ -1.84
YPT1YFL038C YCR108CQ3E819 63 aa3.53□□□□□ -1.84
YPT1YFL038C QCR10P37299 77 aa3.52□□□□□ -1.85
YPT1YFL038C YBL044WP38194 122 aa3.51□□□□□ -1.85
YPT1YFL038C YGL014C-AP0C5N1 53 aa3.49□□□□□ -1.85
YPT1YFL038C YJL009WP47078 108 aa3.48□□□□□ -1.85
YPT1YFL038C YML054C-AQ3E809 52 aa3.46□□□□□ -1.86
YPT1YFL038C RPL37AP49166 88 aaKnown RBP3.42□□□□□ -1.86
YPT1YFL038C SOM1Q05676 74 aa3.36□□□□□ -1.87
YPT1YFL038C YDR210WQ03482 75 aa3.35□□□□□ -1.87
YPT1YFL038C YOR072W-BQ3E832 53 aa3.29□□□□□ -1.88
YPT1YFL038C HHY1P39982 102 aa3.17□□□□□ -1.9
YPT1YFL038C YBR072C-AQ3E794 53 aa3.17□□□□□ -1.9
YPT1YFL038C YER078W-AQ3E7A2 54 aa2.81□□□□□ -1.96
YPT1YFL038C RPS29BP41058 56 aaKnown RBP2.75□□□□□ -1.97
YPT1YFL038C YHR050W-AQ05451 56 aa2.66□□□□□ -1.98
YPT1YFL038C YER175W-AQ8TGU4 54 aa2.64□□□□□ -1.99
YPT1YFL038C YHR032W-AP0C5N6 59 aa2.61□□□□□ -1.99
YPT1YFL038C RPS29AP41057 56 aaKnown RBP2.6□□□□□ -1.99
YPT1YFL038C YAL067W-AQ8TGK6 75 aa2.49□□□□□ -2.01
YPT1YFL038C YOL164W-AQ3E7A5 60 aa2.47□□□□□ -2.01
YPT1YFL038C YLR157W-EP0CF00 54 aa2.21□□□□□ -2.06
YPT1YFL038C YHR086W-AQ3E746 53 aa1.93□□□□□ -2.1
Retrieved 63 of 5,963 RNA–protein pairs in 9.8 ms