RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TNNC2P02585 160 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 MBL2P11226 248 aaPredicted RBP8.33□□□□□ -1.08
CLK1-215ENST00000621181 ADH5P11766 374 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 GAP43P17677 238 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 TXLNAP40222 546 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 KIR2DL1P43626 348 aaPredicted RBP8.33□□□□□ -1.08
CLK1-215ENST00000621181 CASP5P51878 434 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 NOP14P78316 857 aaKnown RBP8.33□□□□□ -1.08
CLK1-215ENST00000621181 RPL6Q02878 288 aaKnown RBP8.33□□□□□ -1.08
CLK1-215ENST00000621181 SF3A1Q15459 793 aaKnown RBP8.33□□□□□ -1.08
CLK1-215ENST00000621181 DUOXA1Q1HG43 343 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 LCE2DQ5TA82 110 aaPredicted RBP8.33□□□□□ -1.08
CLK1-215ENST00000621181 TDRD10Q5VZ19 366 aaKnown RBP8.33□□□□□ -1.08
CLK1-215ENST00000621181 ZNF513Q8N8E2 541 aaPredicted RBP8.33□□□□□ -1.08
CLK1-215ENST00000621181 KIAA1958Q8N8K9 716 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 CEP76Q8TAP6 659 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 KBTBD7Q8WVZ9 684 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 PCED1BQ96HM7 432 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 TTLL2Q9BWV7 592 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 STRA6Q9BX79 667 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 FSCN3Q9NQT6 498 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 TBC1D14Q9P2M4 693 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 USP25Q9UHP3 1055 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 MBD1Q9UIS9 605 aaPredicted RBP8.33□□□□□ -1.08
CLK1-215ENST00000621181 PILRBQ9UKJ0 227 aa8.33□□□□□ -1.08
CLK1-215ENST00000621181 VPS37CA5D8V6 355 aaPredicted RBP8.32□□□□□ -1.08
CLK1-215ENST00000621181 ZBTB24O43167 697 aaPredicted RBP8.32□□□□□ -1.08
CLK1-215ENST00000621181 OPHN1O60890 802 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 ADAM23O75077 832 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 ADCY5O95622 1261 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 OLFM2O95897 454 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 OAS1P00973 400 aaKnown RBP8.32□□□□□ -1.08
CLK1-215ENST00000621181 TNFRSF4P43489 277 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 TAF10Q12962 218 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 SEMA3BQ13214 749 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 ALCAMQ13740 583 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 DUOXA2Q1HG44 320 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 MAP7D1Q3KQU3 841 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 PREPLQ4J6C6 727 aaPredicted RBP8.32□□□□□ -1.08
CLK1-215ENST00000621181 MDH1BQ5I0G3 518 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 LY6G5CQ5SRR4 150 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 RRAGBQ5VZM2 374 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 BTBD8Q5XKL5 378 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 FAM173BQ6P4H8 233 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 RHBDF2Q6PJF5 856 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 NUDT18Q6ZVK8 323 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 USP49Q70CQ1 688 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 SV2BQ7L1I2 683 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 TRMT11Q7Z4G4 463 aaKnown RBP8.32□□□□□ -1.08
CLK1-215ENST00000621181 BRAPQ7Z569 592 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 RABEPKQ7Z6M1 372 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 PIP4P1Q86T03 277 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 GPD1LQ8N335 351 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 DEFB119Q8N690 84 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 MYCBPAPQ8TBZ2 947 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 SNX25Q9H3E2 840 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 OLFML3Q9NRN5 406 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 INTS13Q9NVM9 706 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 ADAMTS9Q9P2N4 1935 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 TNRC6BQ9UPQ9 1833 aaKnown RBP8.32□□□□□ -1.08
CLK1-215ENST00000621181 CEP192Q8TEP8 1941 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 PLXND1Q9Y4D7 1925 aa8.32□□□□□ -1.08
CLK1-215ENST00000621181 A0A0A0MRY4 1105 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 UPK3BL1B0FP48 263 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 UPK3BL2E5RIL1 263 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 H0Y626 953 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 PRPF6O94906 941 aaKnown RBP8.31□□□□□ -1.08
CLK1-215ENST00000621181 TRIM16O95361 564 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 SERPINF2P08697 491 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 GNL1P36915 607 aaPredicted RBP8.31□□□□□ -1.08
CLK1-215ENST00000621181 KRT85P78386 507 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 GAD2Q05329 585 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 ZNF33AQ06730 810 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 ACACAQ13085 2346 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 ANO4Q32M45 955 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 SLC36A4Q6YBV0 504 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 CHCHD4Q8N4Q1 142 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 MINDY1Q8N5J2 469 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 NAT16Q8N8M0 369 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 OR5B17Q8NGF7 314 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 OR6B3Q8NGW1 331 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 DNAJC19Q96DA6 116 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 OTUB2Q96DC9 234 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 C8orf48Q96LL4 319 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 SPTLC3Q9NUV7 552 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 CALCOCO1Q9P1Z2 691 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 DEC1Q9P2X7 70 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 SLC6A14Q9UN76 642 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 SH3BP1Q9Y3L3 701 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 LAMA5O15230 3695 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 PTPRJQ12913 1337 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 E2F8A0AVK6 867 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 ZNF233A6NK53 670 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 KIAA0391O15091 583 aaKnown RBP8.31□□□□□ -1.08
CLK1-215ENST00000621181 HOXB2P14652 356 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 WARSP23381 471 aaKnown RBP8.31□□□□□ -1.08
CLK1-215ENST00000621181 SURF1Q15526 300 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 ZNF423Q2M1K9 1284 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 C10orf76Q5T2E6 689 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 PEAR1Q5VY43 1037 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms