RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 A0A0A0MRY4 1105 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 CCDC163A0A0D9SF12 145 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 FGFR1OPO95684 399 aaKnown RBP11.09□□□□□ -0.63
CCDC9-203ENST00000596938 ATP5C1P36542 298 aaKnown RBP11.09□□□□□ -0.63
CCDC9-203ENST00000596938 OPRD1P41143 372 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 EIF2DP41214 584 aaKnown RBP11.09□□□□□ -0.63
CCDC9-203ENST00000596938 SLC8A3P57103 927 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 PAK1Q13153 545 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 GAB4Q2WGN9 574 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 RAB41Q5JT25 222 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 NAIF1Q69YI7 327 aaPredicted RBP11.09□□□□□ -0.63
CCDC9-203ENST00000596938 HTR3DQ70Z44 454 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 LONP2Q86WA8 852 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 TRIM59Q8IWR1 403 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 UBR7Q8N806 425 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 LMO3Q8TAP4 145 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 EZH1Q92800 747 aaPredicted RBP11.09□□□□□ -0.63
CCDC9-203ENST00000596938 KLF16Q9BXK1 252 aaPredicted RBP11.09□□□□□ -0.63
CCDC9-203ENST00000596938 SRRTQ9BXP5 876 aaKnown RBP11.09□□□□□ -0.63
CCDC9-203ENST00000596938 NACA2Q9H009 215 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC9-203ENST00000596938 C2orf42Q9NWW7 574 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 OSER1Q9NX31 292 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 CLIC5Q9NZA1 410 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 SH3BP1Q9Y3L3 701 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 ZNF292O60281 2723 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 PTPRZ1P23471 2315 aaPredicted RBP11.08□□□□□ -0.64
CCDC9-203ENST00000596938 CYP26A1O43174 497 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 HRO43593 1189 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 GREM1O60565 184 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 RNF40O75150 1001 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 TBX18O95935 607 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 ADH1CP00326 375 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 CYP17A1P05093 508 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 PAEPP09466 180 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 VDRP11473 427 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 RARGP13631 454 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 PLA2G4AP47712 749 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 STX17P56962 302 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 CAMK4Q16566 473 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 SGO2Q562F6 1265 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 PM20D1Q6GTS8 502 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 PKN3Q6P5Z2 889 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 CLEC17AQ6ZS10 378 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 SYT13Q7L8C5 426 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 SCD5Q86SK9 330 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 TADA2BQ86TJ2 420 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 CAMKK1Q8N5S9 505 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 EHBP1Q8NDI1 1231 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 JAKMIP2Q96AA8 810 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 NT5C1BQ96P26 610 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 CDK5RAP1Q96SZ6 601 aaKnown RBP11.08□□□□□ -0.64
CCDC9-203ENST00000596938 NMUR1Q9HB89 426 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 RWDD2AQ9UIY3 292 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 DNMT3LQ9UJW3 386 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 CTNND2Q9UQB3 1225 aa11.08□□□□□ -0.64
CCDC9-203ENST00000596938 TICRRQ7Z2Z1 1910 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 A0A1W2PQH9 124 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 K7EQS6 105 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 HOXC11O43248 304 aaPredicted RBP11.07□□□□□ -0.64
CCDC9-203ENST00000596938 AFPP02771 609 aaKnown RBP11.07□□□□□ -0.64
CCDC9-203ENST00000596938 CCDC192P0DO97 292 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 RALAP11233 206 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 FNTBP49356 437 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 GCNT1Q02742 428 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 GAD2Q05329 585 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 GOLGA8FQ08AF8 430 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 DMWDQ09019 674 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 GOLGA8DPQ0D2H9 430 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 LRMPQ12912 555 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 LY6G5CQ5SRR4 150 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 PIGZQ86VD9 579 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 WDR5BQ86VZ2 330 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 TTC30AQ86WT1 665 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 ARHGAP18Q8N392 663 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 GPR161Q8N6U8 529 aaKnown RBP11.07□□□□□ -0.64
CCDC9-203ENST00000596938 MLKLQ8NB16 471 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 SECISBP2LQ93073 1101 aaKnown RBP11.07□□□□□ -0.64
CCDC9-203ENST00000596938 PNKPQ96T60 521 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 SPHK2Q9NRA0 654 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 HESX1Q9UBX0 185 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 NAGPAQ9UK23 515 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
CCDC9-203ENST00000596938 SLC8A2Q9UPR5 921 aa11.07□□□□□ -0.64
CCDC9-203ENST00000596938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC9-203ENST00000596938 PTPRDP23468 1912 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.06□□□□□ -0.64
CCDC9-203ENST00000596938 O00370 1275 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 SCAMP3O14828 347 aaKnown RBP11.06□□□□□ -0.64
CCDC9-203ENST00000596938 XPO1O14980 1071 aaKnown RBP11.06□□□□□ -0.64
CCDC9-203ENST00000596938 ZBED1O96006 694 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 ADH5P11766 374 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 ANP32AP39687 249 aaKnown RBP11.06□□□□□ -0.64
CCDC9-203ENST00000596938 GRIA2P42262 883 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 TNFRSF4P43489 277 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 SLC6A11P48066 632 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 BCAT1P54687 386 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 MRPS21P82921 87 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms