RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ITPRIPL2Q3MIP1 535 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 PM20D1Q6GTS8 502 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 KLHDC10Q6PID8 442 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 TPRG1Q6ZUI0 275 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 SLC35F5Q8WV83 523 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 OSCP1Q8WVF1 389 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 ZNF606Q8WXB4 792 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 EXOC4Q96A65 974 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 PCMTD1Q96MG8 357 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 FAM83CQ9BQN1 747 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 FUCA2Q9BTY2 467 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 DDX23Q9BUQ8 820 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 OSBPL6Q9BZF3 934 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 KCNH6Q9H252 994 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 CCSER2Q9H7U1 834 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 CYLDQ9NQC7 956 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 DUS2Q9NX74 493 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 SIT1Q9Y3P8 196 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 PIAS3Q9Y6X2 628 aa18.18■□□□□ 0.5
SHKBP1-212ENST00000596163 LGALS16A8MUM7 142 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 FOXN3O00409 490 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 RARGP13631 454 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 UCHL3P15374 230 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 ACADSBP45954 432 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 UBXN1Q04323 297 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 NR1H3Q13133 447 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 RUNX3Q13761 415 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 FILIP1LQ4L180 1135 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 DHX40Q8IX18 779 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 SCML4Q8N228 414 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 ZFYVE19Q96K21 471 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 ZSWIM1Q9BR11 485 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 STK33Q9BYT3 514 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 CNGB3Q9NQW8 809 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 SMPD4Q9NXE4 827 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 TBC1D14Q9P2M4 693 aa18.17■□□□□ 0.5
SHKBP1-212ENST00000596163 TULP2O00295 520 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 FBXO21O94952 628 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 YWHAGP61981 247 aaKnown RBP eCLIP18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 ADIGQ0VDE8 80 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 DRAP1Q14919 205 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 UBXN2BQ14CS0 331 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 ZSCAN23Q3MJ62 389 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 C10orf120Q5SQS8 335 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 BTBD8Q5XKL5 378 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 CWF19L1Q69YN2 538 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 RALGPS2Q86X27 583 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 FAM71AQ8IYT1 594 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 CPA6Q8N4T0 437 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 STK32AQ8WU08 396 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 FAM3CQ92520 227 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 ATP2A3Q93084 1043 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 ULBP1Q9BZM6 244 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 NMUR1Q9HB89 426 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 CFAP97Q9P2B7 532 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 DNMT3LQ9UJW3 386 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 SH3BP1Q9Y3L3 701 aa18.16■□□□□ 0.5
SHKBP1-212ENST00000596163 E2F8A0AVK6 867 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 FAM170BA6NMN3 283 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 LCP1P13796 627 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 COL9A1P20849 921 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 KRT9P35527 623 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 GPD2P43304 727 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 RGS7P49802 495 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 SNX16P57768 344 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 IER5LQ5T953 404 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 DPY19L2P1Q6NXN4 242 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 PMF1Q6P1K2 205 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 RSRC2Q7L4I2 434 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 SCD5Q86SK9 330 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 NEK11Q8NG66 645 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 IRGQQ8WZA9 623 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 GOLGA1Q92805 767 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 NAA15Q9BXJ9 866 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 HSD3B7Q9H2F3 369 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 EBF3Q9H4W6 596 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 LTB4R2Q9NPC1 389 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 OLA1Q9NTK5 396 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 GTSE1Q9NYZ3 720 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 CEP83Q9Y592 693 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 FHOD1Q9Y613 1164 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 GREB1Q4ZG55 1949 aa18.15■□□□□ 0.5
SHKBP1-212ENST00000596163 NUP210Q8TEM1 1887 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 GOLGA6L19H0YKK7 550 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 SART1O43290 800 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 NFATC1O95644 943 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 CALCAP01258 141 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 MAGEA9P43362 315 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 PGFP49763 221 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 VCPP55072 806 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 COG7P83436 770 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 TNK2Q07912 1038 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 IQCB1Q15051 598 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 SYCP1Q15431 976 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 DENND1BQ6P3S1 775 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 PJA1Q8NG27 643 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 RNF139Q8WU17 664 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 OTUB2Q96DC9 234 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms