RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 YWHAQP27348 245 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 SLC6A11P48066 632 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 MYL6P60660 151 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 ENPEPQ07075 957 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 ZCWPW2Q504Y3 356 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 SNX30Q5VWJ9 437 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 INTS8Q75QN2 995 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 CCDC33Q8N5R6 958 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 TRIML1Q8N9V2 468 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 OTUB2Q96DC9 234 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 DUSP9Q99956 384 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 INVSQ9Y283 1065 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 SPAG17Q6Q759 2223 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 HELZP42694 1942 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 C4orf47A7E2U8 309 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 CLDN5O00501 218 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 IKBKBO14920 756 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 KHNYNO15037 678 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 KAT7O95251 611 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 APODP05090 189 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 MBL2P11226 248 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 BCKDHBP21953 392 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 KIR2DL1P43626 348 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 CASP4P49662 377 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 CLDN10P78369 228 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 FKBP3Q00688 224 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 DAB2IPQ5VWQ8 1189 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 ISM2Q6H9L7 571 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 PSAPL1Q6NUJ1 521 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 TMEM92Q6UXU6 159 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 FAM186BQ8IYM0 893 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 IL17RCQ8NAC3 791 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 ZFRQ96KR1 1074 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 IL37Q9NZH6 218 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 KIAA1468Q9P260 1216 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 NXF1Q9UBU9 619 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 PTPRDP23468 1912 aa18.59■□□□□ 0.57
SHKBP1-203ENST00000594298 MYO16Q9Y6X6 1858 aa18.58■□□□□ 0.57
SHKBP1-203ENST00000594298 ATP8B3O60423 1300 aa18.58■□□□□ 0.57
SHKBP1-203ENST00000594298 LRRIQ3A6PVS8 624 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 COCHO43405 550 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 EPB41P11171 864 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 ADH5P11766 374 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 HNRNPLP14866 589 aaKnown RBP eCLIP18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 GRIA2P42262 883 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 TNFRSF4P43489 277 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 TUBP50607 506 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 VAMP7P51809 220 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 MESP2Q0VG99 397 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 BIRC3Q13489 604 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 MORC3Q14149 939 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 CAMK4Q16566 473 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 EOGTQ5NDL2 527 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 CYP2U1Q7Z449 544 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 C12orf40Q86WS4 652 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 SFTPA1Q8IWL2 248 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 ALLCQ8N6M5 410 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 FBXO32Q969P5 355 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 ARHGEF4Q9NR80 690 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 ATG2BQ96BY7 2078 aa18.58■□□□□ 0.56
SHKBP1-203ENST00000594298 BICDL2A1A5D9 508 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 FAM92AA1XBS5 289 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 SGK1O00141 431 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 TNFRSF10BO14763 440 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 SCAMP3O14828 347 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 STX10O60499 249 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 KLF8O95600 359 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 P2RY2P41231 377 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 HECTD3Q5T447 861 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 FAM35AQ86V20 835 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 PHTF2Q8N3S3 785 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 TXNDC5Q8NBS9 432 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 KCNV2Q8TDN2 545 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 WHAMMQ8TF30 809 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 TNIP3Q96KP6 325 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 KCNK16Q96T55 309 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 POLMQ9NP87 494 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 LMBRD1Q9NUN5 540 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 COMMD8Q9NX08 183 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 EVLQ9UI08 416 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 SDK1Q7Z5N4 2213 aa18.57■□□□□ 0.56
SHKBP1-203ENST00000594298 ZFHX4Q86UP3 3567 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 BIN1O00499 593 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 CDX4O14627 284 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 HOXC11O43248 304 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 C4BPAP04003 597 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 ZDHHC11BP0C7U3 371 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 TIE1P35590 1138 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 NOVA1P51513 510 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 SLC5A3P53794 718 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 GAD2Q05329 585 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 IFRD2Q12894 506 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 SPDYCQ5MJ68 293 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 LY6G5CQ5SRR4 150 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 ANKRD40Q6AI12 368 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 FOXR2Q6PJQ5 311 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 PAQR9Q6ZVX9 377 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 ETFBKMTQ8IXQ9 262 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms