RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 SDE2Q6IQ49 451 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 KIAA1841Q6NSI8 718 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 LRRC8BQ6P9F7 803 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 KRT28Q7Z3Y7 464 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-203ENST00000585448 KRT77Q7Z794 578 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 C14orf80Q86SX3 495 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 OSTM1Q86WC4 334 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 KIF18BQ86Y91 864 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 NIM1KQ8IY84 436 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 FAM26EQ8N5C1 309 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMAD4-203ENST00000585448 FSIP1Q8NA03 581 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 CALML6Q8TD86 181 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 PYROXD1Q8WU10 500 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 GAB3Q8WWW8 586 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 INPP5DQ92835 1189 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 SPATA17Q96L03 361 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 CCDC43Q96MW1 224 aaKnown RBP6.42□□□□□ -1.38
SMAD4-203ENST00000585448 XPO6Q96QU8 1125 aaKnown RBP6.42□□□□□ -1.38
SMAD4-203ENST00000585448 USP28Q96RU2 1077 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 PLEKHF1Q96S99 279 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 MMS19Q96T76 1030 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 RIOK1Q9BRS2 568 aaKnown RBP6.42□□□□□ -1.38
SMAD4-203ENST00000585448 DESI2Q9BSY9 194 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 VPS16Q9H269 839 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 SLC38A10Q9HBR0 1119 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 DLL4Q9NR61 685 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 ARMC1Q9NVT9 282 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 MAP3K20Q9NYL2 800 aaKnown RBP6.42□□□□□ -1.38
SMAD4-203ENST00000585448 RNF14Q9UBS8 474 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 XPO7Q9UIA9 1087 aaKnown RBP6.42□□□□□ -1.38
SMAD4-203ENST00000585448 ZBTB1Q9Y2K1 713 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 TRIM17Q9Y577 477 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 TNPO3Q9Y5L0 923 aaKnown RBP6.42□□□□□ -1.38
SMAD4-203ENST00000585448 NOX1Q9Y5S8 564 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 PASKQ96RG2 1323 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 PBRM1Q86U86 1689 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 SBNO1A3KN83 1393 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 TRAPPC8Q9Y2L5 1435 aa6.42□□□□□ -1.38
SMAD4-203ENST00000585448 TARBP1Q13395 1621 aaKnown RBP6.41□□□□□ -1.38
SMAD4-203ENST00000585448 MACROD2A1Z1Q3 448 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 FAM83GA6ND36 823 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 SIGLEC16A6NMB1 481 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 BTBD11A6QL63 1104 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 GOLGA8BA8MQT2 603 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 ACOT7O00154 380 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 NDC80O14777 642 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 FFAR3O14843 346 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 PFDN6O15212 129 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 HNRNPCL1O60812 293 aaKnown RBP6.41□□□□□ -1.38
SMAD4-203ENST00000585448 ZNF254O75437 659 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 CYP7B1O75881 506 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 TSPAN9O75954 239 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 BAIAP3O94812 1187 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 SUN1O94901 812 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 LTFP02788 710 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 S100A6P06703 90 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 LDHCP07864 332 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 LYNP07948 512 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 KRT16P08779 473 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 CCNB1P14635 433 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 PSMA5P28066 241 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 SDHAP31040 664 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 CSTF2P33240 577 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMAD4-203ENST00000585448 THBS2P35442 1172 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 PPARGP37231 505 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-203ENST00000585448 STAT5AP42229 794 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 PIK3CAP42336 1068 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 EPS15P42566 896 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 DNM2P50570 870 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 RASSF2P50749 326 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 HSD17B4P51659 736 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 DSTNP60981 165 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 TRAP1Q12931 704 aaKnown RBP6.41□□□□□ -1.38
SMAD4-203ENST00000585448 FZD5Q13467 585 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 CCDC6Q16204 474 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 SHROOM1Q2M3G4 852 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-203ENST00000585448 MYLK3Q32MK0 819 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 TM4SF20Q53R12 229 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 SPATA1Q5VX52 437 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 RAD9BQ6WBX8 426 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 SLC51BQ86UW2 128 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 SFR1Q86XK3 245 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 PTRH1Q86Y79 214 aaKnown RBP6.41□□□□□ -1.38
SMAD4-203ENST00000585448 TRIML2Q8N7C3 387 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 LSMEM1Q8N8F7 131 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 DTX3Q8N9I9 347 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 ANGPTL6Q8NI99 470 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 LRRC8CQ8TDW0 803 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 PRCCQ92733 491 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-203ENST00000585448 DLG3Q92796 817 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 PEX13Q92968 403 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 MFSD3Q96ES6 412 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 GPATCH3Q96I76 525 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 CDHR1Q96JP9 859 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 NOX5Q96PH1 765 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 HEPHQ9BQS7 1158 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 IMPG2Q9BZV3 1241 aa6.41□□□□□ -1.38
SMAD4-203ENST00000585448 CD244Q9BZW8 370 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms