RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 SPATA5Q8NB90 893 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 FEZF2Q8TBJ5 459 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 NT5C1BQ96P26 610 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 MEIS3Q99687 375 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 MRI1Q9BV20 369 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 NELFAQ9H3P2 528 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 PCDHA1Q9Y5I3 950 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 DUSP10Q9Y6W6 482 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 TCF20Q9UGU0 1960 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 MYADML2A6NDP7 307 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 PMM2O15305 246 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 PQBP1O60828 265 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 CLTBP09497 229 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 ZSCAN22P10073 491 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 MYOGP15173 224 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 ATP5JP18859 108 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 SHMT1P34896 483 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 CNR2P34972 360 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 BIRC2Q13490 618 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 SEMA5AQ13591 1074 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 SLFN13Q68D06 897 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 SPTY2D1Q68D10 685 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 SWSAP1Q6NVH7 229 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 TATDN1Q6P1N9 297 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 C1QL4Q86Z23 238 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 FOXP4Q8IVH2 680 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 GIMAP8Q8ND71 665 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 ATXN2LQ8WWM7 1075 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 LRTOMTQ8WZ04 291 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 ZNF512Q96ME7 567 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 GNRHR2Q96P88 292 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 MPHOSPH6Q99547 160 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 MYOCQ99972 504 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 C11orf54Q9H0W9 315 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 KCNH6Q9H252 994 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 WDCPQ9H6R7 721 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 RPAP3Q9H6T3 665 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 MSL2Q9HCI7 577 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 PIH1D3Q9NQM4 214 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 RAI14Q9P0K7 980 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 HDAC5Q9UQL6 1122 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 SMCHD1A6NHR9 2005 aa6.84□□□□□ -1.31
HERPUD1-208ENST00000563911 CDK5RAP2Q96SN8 1893 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 F2RL2O00254 374 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 MGEA5O60502 916 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 CD1AP06126 327 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 PGK2P07205 417 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 IFIT2P09913 472 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 FTH1P19P0C7X4 201 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 PEX2P28328 305 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 RPS19P39019 145 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 PLCD1P51178 756 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 MRPS5P82675 430 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 OS9Q13438 667 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 GRM7Q14831 915 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 FKBP15Q5T1M5 1219 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 AKNAD1Q5T1N1 836 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 XYLT1Q86Y38 959 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 PLXDC1Q8IUK5 500 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 DCBLD1Q8N8Z6 715 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 SLC35B2Q8TB61 432 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 NEUROD6Q96NK8 337 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 OR14A2Q96R54 314 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 APOL5Q9BWW9 433 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 ZNF700Q9H0M5 742 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 ZMAT3Q9HA38 289 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 SARS2Q9NP81 518 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 TBX21Q9UL17 535 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 TPCN1Q9ULQ1 816 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 PCDHA6Q9UN73 950 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 TNNQ9UQP3 1299 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 PLXNA1Q9UIW2 1896 aa6.83□□□□□ -1.32
HERPUD1-208ENST00000563911 PTPRCP08575 1304 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 UMODL1Q5DID0 1318 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 MYO5AQ9Y4I1 1855 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 A0A1W2PPL8 197 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 TCRBV7S2A1N4TA0A589 114 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 NPEPPSL1A6NEC2 478 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 EPOPA6NHQ4 379 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 CXorf49A8MYA2 514 aaPredicted RBP6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 NT5C1B-RDH14C9J2C7 533 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 KBTBD13C9JR72 458 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 KIAA0391O15091 583 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 GRM6O15303 877 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 TIMP1P01033 207 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 LDHCP07864 332 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 MYL3P08590 195 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 MTHFD1P11586 935 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 CSF2RAP15509 400 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 CDK7P50613 346 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 RABGGTBP53611 331 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 RAP2BP61225 183 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 FPGSQ05932 587 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 PABPC1LQ4VXU2 614 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 KHDC1LQ5JSQ8 128 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 ANKS6Q68DC2 871 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 ZNF529Q6P280 563 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms