RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 DLDP09622 509 aaKnown RBP6.73□□□□□ -1.33
VPS29-210ENST00000552130 NPPBP16860 134 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 PRKCAP17252 672 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 PTPN2P17706 415 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 GCH1P30793 250 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 CIITAP33076 1130 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 RFC1P35251 1148 aaPredicted RBP6.73□□□□□ -1.33
VPS29-210ENST00000552130 GP5P40197 560 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 PAFAH1B1P43034 410 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 MCAMP43121 646 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 FNTBP49356 437 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 RARSP54136 660 aaKnown RBP6.73□□□□□ -1.33
VPS29-210ENST00000552130 MLLT6P55198 1093 aaPredicted RBP6.73□□□□□ -1.33
VPS29-210ENST00000552130 RPS3AP61247 264 aaKnown RBP6.73□□□□□ -1.33
VPS29-210ENST00000552130 CYP4F8P98187 520 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 LSAMPQ13449 338 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 FIGNQ5HY92 759 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 SLC30A9Q6PML9 568 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 CYP20A1Q6UW02 462 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 OLFM4Q6UX06 510 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 UNC13DQ70J99 1090 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 RRAGAQ7L523 313 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 METTL23Q86XA0 190 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 LYSMD2Q8IV50 215 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 SCN4BQ8IWT1 228 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 ANKRD35Q8N283 1001 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 AOPEPQ8N6M6 819 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 TMEM52Q8NDY8 209 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 OR52K2Q8NGK3 314 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 KBTBD7Q8WVZ9 684 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 SAMD11Q96NU1 681 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 TRAPPC9Q96Q05 1148 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 MMP19Q99542 508 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 FUT8Q9BYC5 575 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 RPAP3Q9H6T3 665 aaPredicted RBP6.73□□□□□ -1.33
VPS29-210ENST00000552130 SLC35C2Q9NQQ7 365 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 KCNH7Q9NS40 1196 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 CHST7Q9NS84 486 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 SNTG1Q9NSN8 517 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 HCFC1R1Q9NWW0 138 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 NDUFAF4Q9P032 175 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 CGNQ9P2M7 1197 aaKnown RBP6.73□□□□□ -1.33
VPS29-210ENST00000552130 FBXL7Q9UJT9 491 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 MINPP1Q9UNW1 487 aa6.73□□□□□ -1.33
VPS29-210ENST00000552130 ST20-MTHFSA0A0A6YYL1 179 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 NUDT19A8MXV4 375 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 H0YC42 278 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 K7EPI3 171 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 EXOC3O60645 756 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 NOL3O60936 208 aaKnown RBP6.72□□□□□ -1.33
VPS29-210ENST00000552130 TSC22D2O75157 780 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 GGPS1O95749 300 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 INSRRP14616 1297 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 GSPT1P15170 499 aaKnown RBP6.72□□□□□ -1.33
VPS29-210ENST00000552130 TMOD1P28289 359 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 BMP8BP34820 402 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 CTSKP43235 329 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 MAPKAPK2P49137 400 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 CARSP49589 748 aaKnown RBP6.72□□□□□ -1.33
VPS29-210ENST00000552130 ARFIP1P53367 373 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 MORF4L2Q15014 288 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 ACAP1Q15027 740 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 ALG11Q2TAA5 492 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 SMU1Q2TAY7 513 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 KBTBD12Q3ZCT8 623 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 PLEKHN1Q494U1 663 aaPredicted RBP6.72□□□□□ -1.33
VPS29-210ENST00000552130 CEP55Q53EZ4 464 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 KHDC1LQ5JSQ8 128 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 FAM69AQ5T7M9 428 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 GARNL3Q5VVW2 1013 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 CRTC3Q6UUV7 619 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 PLEKHM3Q6ZWE6 761 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 USP49Q70CQ1 688 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 ULK2Q8IYT8 1036 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 MNS1Q8NEH6 495 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 ZNF384Q8TF68 577 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 SEPT1Q8WYJ6 367 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 CDCA5Q96FF9 252 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 PGAP3Q96FM1 320 aaPredicted RBP6.72□□□□□ -1.33
VPS29-210ENST00000552130 SIPA1Q96FS4 1042 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 APOPT1Q96IL0 206 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 SNX27Q96L92 541 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 FCRL3Q96P31 734 aaPredicted RBP6.72□□□□□ -1.33
VPS29-210ENST00000552130 NOL10Q9BSC4 688 aaKnown RBP6.72□□□□□ -1.33
VPS29-210ENST00000552130 SPXQ9BT56 116 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 APOL6Q9BWW8 343 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 TRIM54Q9BYV2 358 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 NT5C3AQ9H0P0 336 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 OPA3Q9H6K4 179 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 SUDS3Q9H7L9 328 aaPredicted RBP6.72□□□□□ -1.33
VPS29-210ENST00000552130 CHODLQ9H9P2 273 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 MID1IP1Q9NPA3 183 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 CLDND1Q9NY35 253 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 ACTR3BQ9P1U1 418 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 CALCOCO1Q9P1Z2 691 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 DNAJB9Q9UBS3 223 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 LPAR3Q9UBY5 353 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 SUN2Q9UH99 717 aa6.72□□□□□ -1.33
VPS29-210ENST00000552130 RUSC2Q8N2Y8 1516 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms