RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TMEM232C9JQI7 657 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 ADAMTS3O15072 1205 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 SEPT4O43236 478 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 SUV39H1O43463 412 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 DNAJC6O75061 913 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 CLSTN1O94985 981 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 PEX11BO96011 259 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 GOLGA8HP0CJ92 632 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 TSPY3P0CV98 308 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 TSPY8P0CW00 308 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 GYPEP15421 78 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 EDNRBP24530 442 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 CTSSP25774 331 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 GZMKP49863 264 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 UBXN2AP68543 259 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 TMPRSS15P98073 1019 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 MEF2AQ02078 507 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-214ENST00000550893 GHRHRQ02643 423 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 LRRC41Q15345 812 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 RABL3Q5HYI8 236 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 GJC2Q5T442 439 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-214ENST00000550893 NAIF1Q69YI7 327 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-214ENST00000550893 TAPT1Q6NXT6 567 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 LHFPL2Q6ZUX7 228 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 LILRA3Q8N6C8 439 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-214ENST00000550893 KLHDC9Q8NEP7 349 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 LMBR1Q8WVP7 490 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 RILPL2Q969X0 211 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 CTAGE1Q96RT6 745 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 CPEB1Q9BZB8 566 aaKnown RBP5.66□□□□□ -1.5
SCAF11-214ENST00000550893 UPF3AQ9H1J1 476 aaKnown RBP5.66□□□□□ -1.5
SCAF11-214ENST00000550893 MROH8Q9H579 483 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 SH2D4AQ9H788 454 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 HOXC10Q9NYD6 342 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 TRPS1Q9UHF7 1281 aa5.66□□□□□ -1.5
SCAF11-214ENST00000550893 C5orf42Q9H799 3197 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 GOLGA8AA7E2F4 631 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 STRNO43815 780 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 RANBP6O60518 1105 aaKnown RBP5.65□□□□□ -1.5
SCAF11-214ENST00000550893 ARIH2O95376 493 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 TOP1P11387 765 aaKnown RBP5.65□□□□□ -1.5
SCAF11-214ENST00000550893 STAT2P52630 851 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 OAZ1P54368 228 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 CDK17Q00537 523 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 APBA1Q02410 837 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 TROAPQ12815 778 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 ARHGEF6Q15052 776 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 IQSEC1Q6DN90 963 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 XYLT1Q86Y38 959 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 PRPF38AQ8NAV1 312 aaKnown RBP5.65□□□□□ -1.5
SCAF11-214ENST00000550893 GLB1L3Q8NCI6 653 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-214ENST00000550893 OR52N2Q8NGI0 321 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 NEU4Q8WWR8 484 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-214ENST00000550893 MAP4K1Q92918 833 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 CLIP3Q96DZ5 547 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 RAX2Q96IS3 184 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 PDCD2LQ9BRP1 358 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 TRIM8Q9BZR9 551 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 PDGFCQ9NRA1 345 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 RNF146Q9NTX7 359 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 CYP39A1Q9NYL5 469 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 GPRC5BQ9NZH0 403 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 MAD2L2Q9UI95 211 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 FEM1BQ9UK73 627 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 STX8Q9UNK0 236 aa5.65□□□□□ -1.5
SCAF11-214ENST00000550893 TNKSO95271 1327 aa5.65□□□□□ -1.51
SCAF11-214ENST00000550893 FRMPD4Q14CM0 1322 aa5.65□□□□□ -1.51
SCAF11-214ENST00000550893 ARID2Q68CP9 1835 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 TRIM43BA6NCK2 446 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 TSPY2A6NKD2 308 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 E7EWF7 191 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 DNM1LO00429 736 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 ITGA10O75578 1167 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 SLC25A27O95847 323 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 PGK1P00558 417 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 ICAM1P05362 532 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 MAKP20794 623 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 CST5P28325 142 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-214ENST00000550893 CNGA1P29973 690 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 PTTG1IPP53801 180 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 SCAND1P57086 179 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 CCT2P78371 535 aaKnown RBP5.64□□□□□ -1.51
SCAF11-214ENST00000550893 CCNA1P78396 465 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 MRPS9P82933 396 aaKnown RBP5.64□□□□□ -1.51
SCAF11-214ENST00000550893 PLS1Q14651 629 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 NECTIN1Q15223 517 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 ADCK5Q3MIX3 580 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 RRP12Q5JTH9 1297 aaKnown RBP5.64□□□□□ -1.51
SCAF11-214ENST00000550893 SYDE2Q5VT97 1194 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 WDR78Q5VTH9 848 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 EGFLAMQ63HQ2 1017 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 CCDC174Q6PII3 467 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 ARMCX2Q7L311 632 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 DOK3Q7L591 496 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 ZNF444Q8N0Y2 327 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-214ENST00000550893 CPXCR1Q8N123 301 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 IL31RAQ8NI17 732 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 TSPEARQ8WU66 669 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 LARP4BQ92615 738 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms