RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ARID3BQ8IVW6 561 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 TTC16Q8NEE8 873 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 UNKQ9C0B0 810 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 TUT1Q9H6E5 874 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 ATAD5Q96QE3 1844 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 ENO1P06733 434 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 ARFIP2P53365 341 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 SURF1Q15526 300 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 BBS12Q6ZW61 710 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 MPP5Q8N3R9 675 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 TTC13Q8NBP0 860 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 C12orf42Q96LP6 360 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 LGMNQ99538 433 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 PPP1R12CQ9BZL4 782 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 GOLGA8TH3BQL2 631 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 APOL1O14791 398 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 MGRN1O60291 552 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 ICAM3P32942 547 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 ABCD1P33897 745 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 GPD2P43304 727 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 AP3M2P53677 418 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 ALDH18A1P54886 795 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 ILDR2Q71H61 639 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 GBP7Q8N8V2 638 aaPredicted RBP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 DEPDC1BQ8WUY9 529 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 USP6NLQ92738 828 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 WDR83Q9BRX9 315 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 SNRNP25Q9BV90 132 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 EIF2AQ9BY44 585 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 TRIM55Q9BYV6 548 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 IFT122Q9HBG6 1241 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 TXLNGQ9NUQ3 528 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 PIN4Q9Y237 131 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 ATXN2Q99700 1313 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 MCM3APO60318 1980 aa14.22□□□□□ -0.13
PRPF40B-209ENST00000548825 APOC4-APOC2K7ER74 178 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 KCNK1O00180 336 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 CLDN5O00501 218 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 FAM189A1O60320 539 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 PIGRP01833 764 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 APOC2P02655 101 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 MYL2P10916 166 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 CYP3A5P20815 502 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 ELF1P32519 619 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 TAF11Q15544 211 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 PLEKHG4Q58EX7 1191 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 DCAF6Q58WW2 860 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 NDUFAF2Q8N183 169 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 SLC16A10Q8TF71 515 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 MED10Q9BTT4 135 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 TBC1D10AQ9BXI6 508 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 NXF3Q9H4D5 531 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 PDZD7Q9H5P4 517 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 RSAD1Q9HA92 442 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 CDHR5Q9HBB8 845 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 PRMT7Q9NVM4 692 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 UBP1Q9NZI7 540 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 SMG5Q9UPR3 1016 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 CILPO75339 1184 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 UNC5CO95185 931 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 TGFB3P10600 412 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 RARBP10826 455 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 LMO2P25791 158 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 ADORA2AP29274 412 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 PGGT1BP53609 377 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 KLHL38Q2WGJ6 581 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 TSHZ1Q6ZSZ6 1077 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 CDHR3Q6ZTQ4 885 aa14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 ALYREFQ86V81 257 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 NKD2Q969F2 451 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 NKX1-2Q9UD57 310 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 ZMYND8Q9ULU4 1186 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-209ENST00000548825 IQANK1A0A1B0GTG1 560 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 CFAP73A6NFT4 308 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 EDF1O60869 148 aaKnown RBP14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 DESP17661 470 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 RBP5P82980 135 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 TAP1Q03518 808 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 PDK4Q16654 411 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 SLC25A41Q8N5S1 370 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 CNPY3Q9BT09 278 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 ZNF518BQ9C0D4 1074 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 SLC24A3Q9HC58 644 aa14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 NOP53Q9NZM5 478 aaKnown RBP14.21□□□□□ -0.14
PRPF40B-209ENST00000548825 GYG2O15488 501 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 HAUS5O94927 633 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 OSBPP22059 807 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 PDE1BQ01064 536 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 CHI3L2Q15782 390 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 TNFAIP8L3Q5GJ75 292 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 CEP128Q6ZU80 1094 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 PCGF5Q86SE9 256 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 NAT8LQ8N9F0 302 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 ANKLE1Q8NAG6 615 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 SLC10A4Q96EP9 437 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 KLC2Q9H0B6 622 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 LGALS13Q9UHV8 139 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 BARX2Q9UMQ3 279 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms