RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 LENG1Q96BZ8 264 aaPredicted RBP11.97□□□□□ -0.49
DDB1-224ENST00000545894 FAM136AQ96C01 138 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 CDHR1Q96JP9 859 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 CYTH2Q99418 400 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 MSTO1Q9BUK6 570 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 MMADHCQ9H3L0 296 aaPredicted RBP11.97□□□□□ -0.49
DDB1-224ENST00000545894 KCNK13Q9HB14 408 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 SAE1Q9UBE0 346 aaPredicted RBP11.97□□□□□ -0.49
DDB1-224ENST00000545894 LRCH1Q9Y2L9 728 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 AHCYL1O43865 530 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 CST8O60676 142 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 KRT36O76013 467 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 NEFHP12036 1026 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 UBA1P22314 1058 aaKnown RBP11.97□□□□□ -0.49
DDB1-224ENST00000545894 TUBP50607 506 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 TNFAIP2Q03169 654 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 SLC34A1Q06495 639 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 PRKD1Q15139 912 aaPredicted RBP11.97□□□□□ -0.49
DDB1-224ENST00000545894 ZRSR2Q15696 482 aaKnown RBP11.97□□□□□ -0.49
DDB1-224ENST00000545894 C11orf91Q3C1V1 193 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 BBS12Q6ZW61 710 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
DDB1-224ENST00000545894 APOPT1Q96IL0 206 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 ZBTB45Q96K62 511 aaPredicted RBP11.97□□□□□ -0.49
DDB1-224ENST00000545894 SYT15Q9BQS2 421 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 ZNF518BQ9C0D4 1074 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 VCXQ9H320 206 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 SYNCQ9H7C4 482 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 C10orf88Q9H8K7 445 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 XPO7Q9UIA9 1087 aaKnown RBP11.97□□□□□ -0.49
DDB1-224ENST00000545894 TELO2Q9Y4R8 837 aa11.97□□□□□ -0.49
DDB1-224ENST00000545894 CNTNAP2Q9UHC6 1331 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 EME2A4GXA9 379 aaPredicted RBP11.96□□□□□ -0.49
DDB1-224ENST00000545894 TMEM63AO94886 807 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 PSMG1O95456 288 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 DLDP09622 509 aaKnown RBP11.96□□□□□ -0.49
DDB1-224ENST00000545894 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
DDB1-224ENST00000545894 SKIP12755 728 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
DDB1-224ENST00000545894 ETV4P43268 484 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 NEK3P51956 506 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 EMC2Q15006 297 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 MTERF2Q49AM1 385 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 DUSP28Q4G0W2 176 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 RINLQ6ZS11 566 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 CCDC60Q8IWA6 550 aaPredicted RBP11.96□□□□□ -0.49
DDB1-224ENST00000545894 STMN2Q93045 179 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 TSC22D3Q99576 134 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 SH3GL3Q99963 347 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 ZWILCHQ9H900 591 aa11.96□□□□□ -0.49
DDB1-224ENST00000545894 FBXO6Q9NRD1 293 aaPredicted RBP11.96□□□□□ -0.49
DDB1-224ENST00000545894 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.96□□□□□ -0.49
DDB1-224ENST00000545894 A0A0B4J269 797 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 TCRBV7S3A2A0A539 114 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 K7ERI5 159 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 CAPN9O14815 690 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 SEPT4O43236 478 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 IL1BP01584 269 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 KRT7P08729 469 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 AKR1A1P14550 325 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 SP100P23497 879 aaPredicted RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 PSMA2P25787 234 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 SP4Q02446 784 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 PTK7Q13308 1070 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 CELF3Q5SZQ8 465 aaKnown RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 CYP4A22Q5TCH4 519 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 LRRC74BQ6ZQY2 392 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 TAB3Q8N5C8 712 aaPredicted RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.95□□□□□ -0.5
DDB1-224ENST00000545894 DEPTORQ8TB45 409 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 NRG4Q8WWG1 115 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 SCG3Q8WXD2 468 aaKnown RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 KCNN1Q92952 543 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 TTC17Q96AE7 1141 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 PRR11Q96HE9 360 aaPredicted RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 FAM111AQ96PZ2 611 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 JPH1Q9HDC5 661 aaPredicted RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 TAS2R1Q9NYW7 299 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 CHMP2BQ9UQN3 213 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 GNEQ9Y223 722 aaKnown RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 IKBKGQ9Y6K9 419 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 MCM3APO60318 1980 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 SMIM24O75264 130 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 ASS1P00966 412 aaKnown RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 BGNP21810 368 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 EIF4BP23588 611 aaKnown RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 CDH5P33151 784 aaPredicted RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 SLC25A11Q02978 314 aaKnown RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 SLC18A2Q05940 514 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 ARHGAP1Q07960 439 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 MTM1Q13496 603 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 HADHQ16836 314 aaKnown RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 SMTNL2Q2TAL5 461 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 XKR3Q5GH77 459 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 FAM91A1Q658Y4 838 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 UNC45BQ8IWX7 931 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 THNSL1Q8IYQ7 743 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 ARHGAP24Q8N264 748 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 WDTC1Q8N5D0 677 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms