RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 KATNAL2Q8IYT4 538 aa10.13□□□□□ -0.79
DDX11-229ENST00000545668 FAM71DQ8N9W8 422 aa10.13□□□□□ -0.79
DDX11-229ENST00000545668 FAM49AQ9H0Q0 323 aaPredicted RBP10.13□□□□□ -0.79
DDX11-229ENST00000545668 GBA2Q9HCG7 927 aaPredicted RBP10.13□□□□□ -0.79
DDX11-229ENST00000545668 LZTS1Q9Y250 596 aa10.13□□□□□ -0.79
DDX11-229ENST00000545668 ZNFX1Q9P2E3 1918 aaKnown RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 LPXNO60711 386 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 P4HA1P13674 534 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 SMPD1P17405 629 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 NRLP54845 237 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 POU5F1BQ06416 359 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 PTK6Q13882 451 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 SLC1A5Q15758 541 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 CCNG2Q16589 344 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 DGKDQ16760 1214 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 SPDYCQ5MJ68 293 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 MAMDC4Q6UXC1 1216 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 C2orf69Q8N8R5 385 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 EXD1Q8NHP7 514 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 FAM81AQ8TBF8 368 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 GRAMD1AQ96CP6 724 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 RBM41Q96IZ5 413 aaKnown RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 FAM161BQ96MY7 647 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 ACAP3Q96P50 834 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 FAM111AQ96PZ2 611 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 PARK7Q99497 189 aaKnown RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 TINF2Q9BSI4 451 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 SIX4Q9UIU6 781 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 I3L4J1 428 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 ARL4CP56559 192 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 ACVR2BQ13705 512 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 PPP2R5DQ14738 602 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 TMEM132DQ14C87 1099 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 FAM187BQ17R55 369 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 KIZQ2M2Z5 673 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 MFSD5Q6N075 450 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 DENND1BQ6P3S1 775 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 C1orf228Q6PIY5 440 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 PLEKHH3Q7Z736 793 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 ANKRD23Q86SG2 305 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 LRRC6Q86X45 466 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.12□□□□□ -0.79
DDX11-229ENST00000545668 GSDMBQ8TAX9 411 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 RAB3IL1Q8TBN0 382 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 MAML3Q96JK9 1138 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 SHCBP1LQ9BZQ2 653 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 ABHD16BQ9H3Z7 469 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 ASB7Q9H672 318 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 SMYD3Q9H7B4 428 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 SETD4Q9NVD3 440 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 GALNT8Q9NY28 637 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 STRIP2Q9ULQ0 834 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 SLC45A1Q9Y2W3 748 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 CELF2O95319 508 aaKnown RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 TMPRSS15P98073 1019 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 GRIK3Q13003 919 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 ZNF268Q14587 947 aaPredicted RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 AMHR2Q16671 573 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 DUSP28Q4G0W2 176 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 ZC3H12AQ5D1E8 599 aaKnown RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 ZNF467Q7Z7K2 595 aaPredicted RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 SPATA24Q86W54 205 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 WDTC1Q8N5D0 677 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 TCP10LQ8TDR4 215 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 HPDLQ96IR7 371 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 HEXIM2Q96MH2 286 aaKnown RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 MORF4L1Q9UBU8 362 aa10.12□□□□□ -0.79
DDX11-229ENST00000545668 NKX1-2Q9UD57 310 aaPredicted RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 ZMYND8Q9ULU4 1186 aaPredicted RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 TMA7Q9Y2S6 64 aaKnown RBP10.12□□□□□ -0.79
DDX11-229ENST00000545668 E2F8A0AVK6 867 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 DYNC1LI2O43237 492 aaPredicted RBP10.11□□□□□ -0.79
DDX11-229ENST00000545668 RNF8O76064 485 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 ENO1P06733 434 aaKnown RBP10.11□□□□□ -0.79
DDX11-229ENST00000545668 KRT3P12035 628 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 PSMC1P62191 440 aaKnown RBP10.11□□□□□ -0.79
DDX11-229ENST00000545668 TAP1Q03518 808 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 GAD2Q05329 585 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 RCN1Q15293 331 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 SLC10A6Q3KNW5 377 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 KCTD21Q4G0X4 260 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 RCOR2Q8IZ40 523 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 KIAA0319LQ8IZA0 1049 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 FBXO36Q8NEA4 188 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 CCDC110Q8TBZ0 833 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 ACTL9Q8TC94 416 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 PPP1R13LQ8WUF5 828 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 EMID1Q96A84 441 aaPredicted RBP10.11□□□□□ -0.79
DDX11-229ENST00000545668 NMD3Q96D46 503 aaKnown RBP10.11□□□□□ -0.79
DDX11-229ENST00000545668 FBXO6Q9NRD1 293 aaPredicted RBP10.11□□□□□ -0.79
DDX11-229ENST00000545668 PSMC3IPQ9P2W1 217 aaPredicted RBP10.11□□□□□ -0.79
DDX11-229ENST00000545668 PCDHGC3Q9UN70 934 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 SIP14410 1827 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 LRRC37A2A6NM11 1700 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 COL1A2P08123 1366 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 RBM47A0AV96 593 aaKnown RBP10.11□□□□□ -0.79
DDX11-229ENST00000545668 UNCXA6NJT0 531 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 MMP3P08254 477 aa10.11□□□□□ -0.79
DDX11-229ENST00000545668 PIGHQ14442 188 aaPredicted RBP10.11□□□□□ -0.79
DDX11-229ENST00000545668 KYAT1Q16773 422 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms