RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 INHBAP08476 426 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 MAP3K7CLP57077 242 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 ANKRD20A8PQ5CZ79 823 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 C9orf57Q5W0N0 161 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 ATP11CQ8NB49 1132 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 LRRC4Q9HBW1 653 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 C2CD2Q9Y426 696 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 CCT8L1PA6NM43 557 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 APOC4-APOC2K7ER74 178 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 APOC2P02655 101 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 GRM5P41594 1212 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 SESN2P58004 480 aaPredicted RBP16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 COPS2P61201 443 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 AP1B1Q10567 949 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 WSCD1Q658N2 575 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 LCLAT1Q6UWP7 414 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 ATXN7L3BQ96GX2 97 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 SUN1O94901 812 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 PFKMP08237 780 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 FOXN2P32314 431 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 PHBP35232 272 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 SULT1E1P49888 294 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 GPX6P59796 221 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 TFDP2Q14188 446 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 SNX17Q15036 470 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 SPDYCQ5MJ68 293 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 SPRYD7Q5W111 196 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 DENND5BQ6ZUT9 1274 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 CCDC185Q8N715 623 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 MCRS1Q96EZ8 462 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 GAD1Q99259 594 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 IQCGQ9H095 443 aaKnown RBP16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 SLC5A4Q9NY91 659 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 PPME1Q9Y570 386 aa16.58■□□□□ 0.25
ATP2C1-224ENST00000533801 CYP2F1P24903 491 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 ADRA1DP25100 572 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 MLH1P40692 756 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 SLC6A3Q01959 620 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 TRPM8Q7Z2W7 1104 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 SPATA21Q7Z572 469 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 ADGRF2Q8IZF7 708 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 TRIP12Q14669 1992 aaPredicted RBP16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 DARSP14868 501 aaKnown RBP16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 ATP2A2P16615 1042 aaKnown RBP16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 HNRNPH1P31943 449 aaKnown RBP16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 CDH5P33151 784 aaPredicted RBP16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 GRIA1P42261 906 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 SLC1A5Q15758 541 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 KBTBD12Q3ZCT8 623 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 MDH1BQ5I0G3 518 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 MFSD5Q6N075 450 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 NKD2Q969F2 451 aaPredicted RBP16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 RNF34Q969K3 372 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 LGMNQ99538 433 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 RHOBTB2Q9BYZ6 727 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 CD248Q9HCU0 757 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 SLC40A1Q9NP59 571 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 ETNK2Q9NVF9 386 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 KLHL14Q9P2G3 628 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 AP4E1Q9UPM8 1137 aa16.58■□□□□ 0.24
ATP2C1-224ENST00000533801 MT-ND3P03897 115 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 GOT1P17174 413 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 PSEN2P49810 448 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 WDR4P57081 412 aaKnown RBP16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 RNASELQ05823 741 aaKnown RBP16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 CES3Q6UWW8 571 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 VSIG1Q86XK7 387 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 DEFB106AQ8N104 65 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 SIX6OS1Q8N1H7 587 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 ARRDC4Q8NCT1 418 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 PCDH19Q8TAB3 1148 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 EDEM1Q92611 657 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 RNF157Q96PX1 679 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 USP15Q9Y4E8 981 aaPredicted RBP16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 CLUHO75153 1309 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 SPARCL1Q14515 664 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 DCAF4L1Q3SXM0 396 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 POLNQ7Z5Q5 900 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 SPATS2Q86XZ4 545 aaKnown RBP16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 PLD5Q8N7P1 536 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 DEPDC1BQ8WUY9 529 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 SNX27Q96L92 541 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 TBCBQ99426 244 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 PCDH18Q9HCL0 1135 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 PSMC3IPQ9P2W1 217 aaPredicted RBP16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 OTOFQ9HC10 1997 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 LAMA3Q16787 3333 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 ERFP50548 548 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 TTC25Q96NG3 672 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 NPHS2Q9NP85 383 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 SLC17A6Q9P2U8 582 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 UBQLN1Q9UMX0 589 aaKnown RBP16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 SHOC2Q9UQ13 582 aa16.57■□□□□ 0.24
ATP2C1-224ENST00000533801 WDR90Q96KV7 1748 aa16.56■□□□□ 0.24
ATP2C1-224ENST00000533801 A0A0G2JND7 137 aa16.56■□□□□ 0.24
ATP2C1-224ENST00000533801 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
ATP2C1-224ENST00000533801 CYB561D2O14569 222 aa16.56■□□□□ 0.24
ATP2C1-224ENST00000533801 POMCP01189 267 aa16.56■□□□□ 0.24
ATP2C1-224ENST00000533801 SLC8A3P57103 927 aa16.56■□□□□ 0.24
ATP2C1-224ENST00000533801 GEMIN4P57678 1058 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms