RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 IL12RB1P42701 662 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 POU5F1Q01860 360 aaKnown RBP18.65■□□□□ 0.58
PVT1-220ENST00000524165 SF3A1Q15459 793 aaKnown RBP18.65■□□□□ 0.58
PVT1-220ENST00000524165 CCDC142Q17RM4 750 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 INAVAQ3KP66 663 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 KRT79Q5XKE5 535 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 GRAMD4Q6IC98 578 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 FAM171BQ6P995 826 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 C4orf50Q6ZRC1 276 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 KCNK18Q7Z418 384 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 NT5DC4Q86YG4 428 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 C4orf32Q8N8J7 132 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 ERLEC1Q96DZ1 483 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 SPHK2Q9NRA0 654 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 KCND2Q9NZV8 630 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 FTSJ1Q9UET6 329 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 EIF2B4Q9UI10 523 aaKnown RBP18.65■□□□□ 0.58
PVT1-220ENST00000524165 RAD54BQ9Y620 910 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 TRIM24O15164 1050 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 EPB41L2O43491 1005 aaKnown RBP18.64■□□□□ 0.57
PVT1-220ENST00000524165 NTRK1P04629 796 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 MBL2P11226 248 aaPredicted RBP18.64■□□□□ 0.57
PVT1-220ENST00000524165 C6P13671 934 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 OXTRP30559 389 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 LHX1P48742 406 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 ACOT2P49753 483 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 AFF3P51826 1226 aaKnown RBP18.64■□□□□ 0.57
PVT1-220ENST00000524165 NOP14P78316 857 aaKnown RBP18.64■□□□□ 0.57
PVT1-220ENST00000524165 PKDCCQ504Y2 493 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 FMNL3Q8IVF7 1028 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 SPACA3Q8IXA5 215 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 TMEM176AQ96HP8 235 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 MAGEC2Q9UBF1 373 aaPredicted RBP18.64■□□□□ 0.57
PVT1-220ENST00000524165 UBR5O95071 2799 aaPredicted RBP18.64■□□□□ 0.57
PVT1-220ENST00000524165 TEX15Q9BXT5 2789 aa18.64■□□□□ 0.57
PVT1-220ENST00000524165 TP53BP1Q12888 1972 aaPredicted RBP18.63■□□□□ 0.57
PVT1-220ENST00000524165 GABRDO14764 452 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 C1SP09871 688 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 ANXA13P27216 316 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 CSNK1EP49674 416 aaKnown RBP18.63■□□□□ 0.57
PVT1-220ENST00000524165 CCT8P50990 548 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 KIF19Q2TAC6 998 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 ANO4Q32M45 955 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 TTC38Q5R3I4 469 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 SLC39A4Q6P5W5 647 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 SYT2Q8N9I0 419 aaPredicted RBP18.63■□□□□ 0.57
PVT1-220ENST00000524165 SCFD1Q8WVM8 642 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 IGSF8Q969P0 613 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 SEMA4CQ9C0C4 833 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 SNX11Q9Y5W9 270 aa18.63■□□□□ 0.57
PVT1-220ENST00000524165 KCNJ18B7U540 433 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 PAPSS1O43252 624 aaPredicted RBP18.62■□□□□ 0.57
PVT1-220ENST00000524165 ABL1P00519 1130 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 ACTN2P35609 894 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 GRIK1P39086 918 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 CSRP3P50461 194 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 TARDBPQ13148 414 aaKnown RBP eCLIP18.62■□□□□ 0.57
PVT1-220ENST00000524165 OSTM1Q86WC4 334 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 TMEM25Q86YD3 366 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 KCTD17Q8N5Z5 321 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 ZFRQ96KR1 1074 aaKnown RBP18.62■□□□□ 0.57
PVT1-220ENST00000524165 PCED1AQ9H1Q7 454 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 DNAJC17Q9NVM6 304 aaKnown RBP18.62■□□□□ 0.57
PVT1-220ENST00000524165 GDAP2Q9NXN4 497 aa18.62■□□□□ 0.57
PVT1-220ENST00000524165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.61■□□□□ 0.57
PVT1-220ENST00000524165 PRRT4C9JH25 899 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 TRIM66O15016 1216 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 IGLV3-19P01714 112 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 TPMTP51580 245 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 ZNF132P52740 706 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 FOSBP53539 338 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 CCDC173Q0VFZ6 552 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 KCNH2Q12809 1159 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 TEAD4Q15561 434 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 MAPRE1Q15691 268 aaKnown RBP18.61■□□□□ 0.57
PVT1-220ENST00000524165 FUT11Q495W5 492 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 ADGRF2Q8IZF7 708 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 TOP6BLQ8N6T0 577 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 SLITRK1Q96PX8 696 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 NUP58Q9BVL2 599 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 OSGEPQ9NPF4 335 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 ANKRD6Q9Y2G4 727 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 SH3BP1Q9Y3L3 701 aa18.61■□□□□ 0.57
PVT1-220ENST00000524165 PP2D1A8MPX8 630 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 SLC28A2O43868 658 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 CACNG3O60359 315 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 IL18RAPO95256 599 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 BDNFP23560 247 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 POLR2BP30876 1174 aaKnown RBP18.6■□□□□ 0.57
PVT1-220ENST00000524165 TAF10Q12962 218 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 STARD3Q14849 445 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 ADALQ6DHV7 355 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 SKAP1Q86WV1 359 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 BBS7Q8IWZ6 715 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 LRRC52Q8N7C0 313 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 NSUN7Q8NE18 718 aaKnown RBP18.6■□□□□ 0.57
PVT1-220ENST00000524165 MYLPFQ96A32 169 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 XPO6Q96QU8 1125 aaKnown RBP18.6■□□□□ 0.57
PVT1-220ENST00000524165 ARID3AQ99856 593 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 MMTAG2Q9BU76 263 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms