RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 MAP3K21Q5TCX8 1036 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 TRMT13Q9NUP7 481 aaKnown RBP27.01■■□□□ 1.91
COL13A1-214ENST00000522165 LHX1P48742 406 aa27■■□□□ 1.91
COL13A1-214ENST00000522165 NOMO1Q15155 1222 aa27■■□□□ 1.91
COL13A1-214ENST00000522165 CA9Q16790 459 aa27■■□□□ 1.91
COL13A1-214ENST00000522165 TRIM71Q2Q1W2 868 aaKnown RBP27■■□□□ 1.91
COL13A1-214ENST00000522165 EFHC1Q5JVL4 640 aa27■■□□□ 1.91
COL13A1-214ENST00000522165 MFSD5Q6N075 450 aa27■■□□□ 1.91
COL13A1-214ENST00000522165 NPNTQ6UXI9 565 aa27■■□□□ 1.91
COL13A1-214ENST00000522165 UNC45BQ8IWX7 931 aa27■■□□□ 1.91
COL13A1-214ENST00000522165 CRTAC1Q9NQ79 661 aa27■■□□□ 1.91
COL13A1-214ENST00000522165 DDX20Q9UHI6 824 aaKnown RBP27■■□□□ 1.91
COL13A1-214ENST00000522165 SHOC2Q9UQ13 582 aa27■■□□□ 1.91
COL13A1-214ENST00000522165 AGTP01019 485 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 RBP3P10745 1247 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 SLCO1A2P46721 670 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 HNRNPH2P55795 449 aaKnown RBP26.99■■□□□ 1.91
COL13A1-214ENST00000522165 AUHQ13825 339 aaKnown RBP26.99■■□□□ 1.91
COL13A1-214ENST00000522165 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.99■■□□□ 1.91
COL13A1-214ENST00000522165 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.99■■□□□ 1.91
COL13A1-214ENST00000522165 PRDM4Q9UKN5 801 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 A0A0U1RQF3 1178 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 CASTOR2A6NHX0 329 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 BEST1O76090 585 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 IVLP07476 585 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 LSP1P33241 339 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 MAGEA4P43358 317 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 ADIGQ0VDE8 80 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 UPP1Q16831 310 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 ANKRD20A8PQ5CZ79 823 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 TNFAIP8L3Q5GJ75 292 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 FAM26DQ5JW98 314 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 ERMARDQ5T6L9 678 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 DSTYKQ6XUX3 929 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 RNF180Q86T96 592 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 KCTD13Q8WZ19 329 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 P3H4Q92791 437 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 CAPNS2Q96L46 248 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 NOD1Q9Y239 953 aa26.99■■□□□ 1.91
COL13A1-214ENST00000522165 CABYRO75952 493 aa26.98■■□□□ 1.91
COL13A1-214ENST00000522165 RPL22P35268 128 aaKnown RBP26.98■■□□□ 1.91
COL13A1-214ENST00000522165 ADCY1Q08828 1119 aa26.98■■□□□ 1.91
COL13A1-214ENST00000522165 CLEC20AQ6ZU45 233 aa26.98■■□□□ 1.91
COL13A1-214ENST00000522165 PCGF5Q86SE9 256 aa26.98■■□□□ 1.91
COL13A1-214ENST00000522165 REM2Q8IYK8 340 aaPredicted RBP26.98■■□□□ 1.91
COL13A1-214ENST00000522165 PQLC3Q8N755 202 aa26.98■■□□□ 1.91
COL13A1-214ENST00000522165 PRCCQ92733 491 aaPredicted RBP26.98■■□□□ 1.91
COL13A1-214ENST00000522165 SYT15Q9BQS2 421 aa26.98■■□□□ 1.91
COL13A1-214ENST00000522165 PAAF1Q9BRP4 392 aa26.98■■□□□ 1.91
COL13A1-214ENST00000522165 MED10Q9BTT4 135 aa26.98■■□□□ 1.91
COL13A1-214ENST00000522165 FARP1Q9Y4F1 1045 aaPredicted RBP26.98■■□□□ 1.91
COL13A1-214ENST00000522165 ZNF487B1APH4 448 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 IFI35P80217 286 aaPredicted RBP26.97■■□□□ 1.91
COL13A1-214ENST00000522165 LONRF1Q17RB8 773 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 PLD5Q8N7P1 536 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 FAM71DQ8N9W8 422 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 RNF169Q8NCN4 708 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 FAF2Q96CS3 445 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 C9orf72Q96LT7 481 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 ADAM2Q99965 735 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 ZNF670Q9BS34 389 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 TIMM13Q9Y5L4 95 aaPredicted RBP26.97■■□□□ 1.91
COL13A1-214ENST00000522165 MATKP42679 507 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 ACLYP53396 1101 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 ATXN1P54253 815 aaKnown RBP26.97■■□□□ 1.91
COL13A1-214ENST00000522165 ROR1Q01973 937 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 PCDH19Q8TAB3 1148 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 SERPINB12Q96P63 405 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 STMN4Q9H169 189 aaPredicted RBP26.97■■□□□ 1.91
COL13A1-214ENST00000522165 SAYSD1Q9NPB0 183 aa26.97■■□□□ 1.91
COL13A1-214ENST00000522165 TCEA3O75764 348 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 FAM200BP0CF97 657 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 HOXD10P28358 340 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 CTCFP49711 727 aaPredicted RBP26.96■■□□□ 1.91
COL13A1-214ENST00000522165 DPYSL2Q16555 572 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 SLC9A4Q6AI14 798 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 C1orf228Q6PIY5 440 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 STRADAQ7RTN6 431 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 NDRG1Q92597 394 aaKnown RBP26.96■■□□□ 1.91
COL13A1-214ENST00000522165 KRT82Q9NSB4 513 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 APOL1O14791 398 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 TGM2P21980 687 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 L1CAMP32004 1257 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 MRPS5P82675 430 aaKnown RBP26.96■■□□□ 1.91
COL13A1-214ENST00000522165 DEFB115Q30KQ5 88 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 TIGD5Q53EQ6 642 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 DARS2Q6PI48 645 aaKnown RBP26.96■■□□□ 1.91
COL13A1-214ENST00000522165 DEFB106AQ8N104 65 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 CD99L2Q8TCZ2 262 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 CPT1BQ92523 772 aa26.96■■□□□ 1.91
COL13A1-214ENST00000522165 CNOT10Q9H9A5 744 aaKnown RBP26.96■■□□□ 1.91
COL13A1-214ENST00000522165 DAB1O75553 588 aa26.95■■□□□ 1.9
COL13A1-214ENST00000522165 STIP1P31948 543 aaKnown RBP26.95■■□□□ 1.9
COL13A1-214ENST00000522165 FOXR1Q6PIV2 292 aa26.95■■□□□ 1.9
COL13A1-214ENST00000522165 ZC3H18Q86VM9 953 aaKnown RBP26.95■■□□□ 1.9
COL13A1-214ENST00000522165 PPIL6Q8IXY8 311 aa26.95■■□□□ 1.9
COL13A1-214ENST00000522165 FAM149B1Q96BN6 582 aa26.95■■□□□ 1.9
COL13A1-214ENST00000522165 PGBD4Q96DM1 585 aa26.95■■□□□ 1.9
COL13A1-214ENST00000522165 LRRC4Q9HBW1 653 aa26.95■■□□□ 1.9
COL13A1-214ENST00000522165 POMCP01189 267 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms