RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 GOLGA8JA6NMD2 632 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 COCHO43405 550 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 NDUFS2O75306 463 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 DKK1O94907 266 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 GNSP15586 552 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 WARSP23381 471 aaKnown RBP16.62■□□□□ 0.25
HDAC6-236ENST00000498808 UBA7P41226 1012 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 CYP4F3Q08477 520 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 SYCP2LQ5T4T6 812 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 TDRD10Q5VZ19 366 aaKnown RBP16.62■□□□□ 0.25
HDAC6-236ENST00000498808 TMEM25Q86YD3 366 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 CHPFQ8IZ52 775 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 MYCBPAPQ8TBZ2 947 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 SETD7Q8WTS6 366 aaKnown RBP16.62■□□□□ 0.25
HDAC6-236ENST00000498808 LARP4BQ92615 738 aaKnown RBP16.62■□□□□ 0.25
HDAC6-236ENST00000498808 FOXJ1Q92949 421 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 MRGPRX1Q96LB2 322 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 SPHK2Q9NRA0 654 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 RAD54BQ9Y620 910 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 PTPRJQ12913 1337 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 SHROOM3Q8TF72 1996 aa16.62■□□□□ 0.25
HDAC6-236ENST00000498808 A0A087WV48 116 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 TMEM191BP0C7N4 346 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 ATXN1LP0C7T5 689 aaKnown RBP16.61■□□□□ 0.25
HDAC6-236ENST00000498808 GRIN1Q05586 938 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 IFRD2Q12894 506 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-236ENST00000498808 CAMK2BQ13554 666 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 ANO4Q32M45 955 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 PREPLQ4J6C6 727 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-236ENST00000498808 MDH1BQ5I0G3 518 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 WDR45BQ5MNZ6 344 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 DNASE2BQ8WZ79 361 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 HPDLQ96IR7 371 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 GABRG3Q99928 467 aa16.61■□□□□ 0.25
HDAC6-236ENST00000498808 A0A1B0GTW7 788 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 TRABD2BA6NFA1 517 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 PRRT4C9JH25 899 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 ZBTB24O43167 697 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-236ENST00000498808 C1QL1O75973 258 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 LDHAP00338 332 aaKnown RBP16.6■□□□□ 0.25
HDAC6-236ENST00000498808 DDIT3P35638 169 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 BNC1Q01954 994 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 MYO1EQ12965 1108 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 GRAMD4Q6IC98 578 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 NUDT18Q6ZVK8 323 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 SCUBE3Q8IX30 993 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 ZCCHC9Q8N567 271 aaKnown RBP16.6■□□□□ 0.25
HDAC6-236ENST00000498808 KRI1Q8N9T8 703 aaKnown RBP16.6■□□□□ 0.25
HDAC6-236ENST00000498808 OR5B17Q8NGF7 314 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 DUSP9Q99956 384 aaKnown RBP16.6■□□□□ 0.25
HDAC6-236ENST00000498808 CBWD1Q9BRT8 395 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 ZNF518BQ9C0D4 1074 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 TM7SF3Q9NS93 570 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 INTS13Q9NVM9 706 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 FNDC3AQ9Y2H6 1198 aaKnown RBP16.6■□□□□ 0.25
HDAC6-236ENST00000498808 SH3BP1Q9Y3L3 701 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 KNL1Q8NG31 2342 aa16.6■□□□□ 0.25
HDAC6-236ENST00000498808 CILPO75339 1184 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 ZNF883P0CG24 379 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 GARTP22102 1010 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 CD6P30203 668 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 C19orf57Q0VDD7 668 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 L1TD1Q5T7N2 865 aaKnown RBP16.59■□□□□ 0.25
HDAC6-236ENST00000498808 SDE2Q6IQ49 451 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 KIAA1324Q6UXG2 1013 aaKnown RBP16.59■□□□□ 0.25
HDAC6-236ENST00000498808 DBX2Q6ZNG2 339 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 HS2ST1Q7LGA3 356 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 DYMQ7RTS9 669 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 ANKRD36BP1Q96IX9 119 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 ZSCAN31Q96LW9 406 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-236ENST00000498808 ACCSQ96QU6 501 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 UBL7Q96S82 380 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-236ENST00000498808 MRPL45Q9BRJ2 306 aaKnown RBP16.59■□□□□ 0.25
HDAC6-236ENST00000498808 TRIM9Q9C026 710 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 GAREM1Q9H706 876 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 MRPL44Q9H9J2 332 aaKnown RBP16.59■□□□□ 0.25
HDAC6-236ENST00000498808 DNAJC17Q9NVM6 304 aaKnown RBP16.59■□□□□ 0.25
HDAC6-236ENST00000498808 EXOC7Q9UPT5 735 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 NFE2L3Q9Y4A8 694 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 CABIN1Q9Y6J0 2220 aa16.59■□□□□ 0.25
HDAC6-236ENST00000498808 MEI4A8MW99 385 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 WASH3PC4AMC7 463 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 YWHAQP27348 245 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 CASP5P51878 434 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 HECTD3Q5T447 861 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 NUP93Q8N1F7 819 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 PDZD8Q8NEN9 1154 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 RASSF8Q8NHQ8 419 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.24
HDAC6-236ENST00000498808 OVCA2Q8WZ82 227 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 FBXO32Q969P5 355 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 TOE1Q96GM8 510 aaKnown RBP16.58■□□□□ 0.24
HDAC6-236ENST00000498808 ELOVL4Q9GZR5 314 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 DPEP3Q9H4B8 488 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 CCSER2Q9H7U1 834 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 PRDM16Q9HAZ2 1276 aa16.58■□□□□ 0.24
HDAC6-236ENST00000498808 WSB2Q9NYS7 404 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-236ENST00000498808 TBC1D7Q9P0N9 293 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms