RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 CDC23Q9UJX2 597 aa3.95□□□□□ -1.78
PHC3-216ENST00000497171 MAGED2Q9UNF1 606 aaPredicted RBP3.95□□□□□ -1.78
PHC3-216ENST00000497171 LRCH1Q9Y2L9 728 aa3.95□□□□□ -1.78
PHC3-216ENST00000497171 PCDHGB2Q9Y5G2 931 aa3.95□□□□□ -1.78
PHC3-216ENST00000497171 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.95□□□□□ -1.78
PHC3-216ENST00000497171 PIM1P11309 404 aaPredicted RBP3.94□□□□□ -1.78
PHC3-216ENST00000497171 SFPQP23246 707 aaKnown RBP eCLIP3.94□□□□□ -1.78
PHC3-216ENST00000497171 TRAPPC10P48553 1259 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 ARFIP2P53365 341 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 SATB1Q01826 763 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 KRT17Q04695 432 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 PMS2P11Q13670 270 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 TWIST1Q15672 202 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 TBCCQ15814 346 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 ARL13BQ3SXY8 428 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 DCAF12L1Q5VU92 463 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 IZUMO3Q5VZ72 239 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 FAM160B1Q5W0V3 765 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 TAPT1Q6NXT6 567 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 ANKRD16Q6P6B7 361 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 SHC4Q6S5L8 630 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 LAYNQ6UX15 382 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 RNF44Q7L0R7 432 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 FAM9AQ8IZU1 332 aaPredicted RBP3.94□□□□□ -1.78
PHC3-216ENST00000497171 CFAP52Q8N1V2 620 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 ENAHQ8N8S7 591 aaPredicted RBP3.94□□□□□ -1.78
PHC3-216ENST00000497171 DEPTORQ8TB45 409 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 POF1BQ8WVV4 589 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 IQCDQ96DY2 449 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 LRRC46Q96FV0 321 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 LYZL4Q96KX0 146 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 SNX22Q96L94 193 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 ACTRT3Q9BYD9 372 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 PPCSQ9HAB8 311 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 SMURF2Q9HAU4 748 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 A1CFQ9NQ94 594 aaKnown RBP3.94□□□□□ -1.78
PHC3-216ENST00000497171 SERHLQ9NQF3 203 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 GJB4Q9NTQ9 266 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 ZSCAN32Q9NX65 697 aa3.94□□□□□ -1.78
PHC3-216ENST00000497171 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 ABHD14A-ACY1A0A1B0GW23 586 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 TRIM43BA6NCK2 446 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 ANXA2P07355 339 aaKnown RBP3.93□□□□□ -1.78
PHC3-216ENST00000497171 HARSP12081 509 aaKnown RBP3.93□□□□□ -1.78
PHC3-216ENST00000497171 TSHRP16473 764 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 CARSP49589 748 aaKnown RBP3.93□□□□□ -1.78
PHC3-216ENST00000497171 NDUFV1P49821 464 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 ITGA8P53708 1063 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 LINC00205P59089 165 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 TRIM14Q14142 442 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 GRAMD1BQ3KR37 738 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 Q4G0T1 1027 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 ANO1Q5XXA6 986 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 GGT6Q6P531 493 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 UNC13DQ70J99 1090 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 MICU3Q86XE3 530 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 CERS3Q8IU89 383 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 ATP11CQ8NB49 1132 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 OR56A3Q8NH54 315 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 CUL5Q93034 780 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 ZNF566Q969W8 418 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 SPSB4Q96A44 273 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 TRIM43Q96BQ3 446 aaPredicted RBP3.93□□□□□ -1.78
PHC3-216ENST00000497171 REPS1Q96D71 796 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 C5orf34Q96MH7 638 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 SLC46A1Q96NT5 459 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 ASB2Q96Q27 587 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 FAM118BQ9BPY3 351 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 CRB3Q9BUF7 120 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 DPH1Q9BZG8 443 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 PTPRHQ9HD43 1115 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 ZNF212Q9UDV6 495 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 PAXBP1Q9Y5B6 917 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 RAD54BQ9Y620 910 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 SPATA31A3Q5VYP0 1347 aa3.93□□□□□ -1.78
PHC3-216ENST00000497171 LOC102724159A0A0B4J2E5 919 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 MBD3L4A6NDZ8 208 aaPredicted RBP3.92□□□□□ -1.78
PHC3-216ENST00000497171 MBD3L3A6NE82 208 aaPredicted RBP3.92□□□□□ -1.78
PHC3-216ENST00000497171 FAM90A8PA6NJQ4 464 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 RAB27BO00194 218 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 THAP12O43422 761 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 EIF3JO75822 258 aaKnown RBP3.92□□□□□ -1.78
PHC3-216ENST00000497171 MT-ND5P03915 603 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 FAM90A13PP0C7W8 464 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 FAM90A24PP0C7X0 464 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 NHLRC4P0CG21 123 aaPredicted RBP3.92□□□□□ -1.78
PHC3-216ENST00000497171 XRCC6P12956 609 aaKnown RBP eCLIP3.92□□□□□ -1.78
PHC3-216ENST00000497171 FGFR2P21802 821 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 PPM1AP35813 382 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 EEFSECP57772 596 aaKnown RBP3.92□□□□□ -1.78
PHC3-216ENST00000497171 LILRA4P59901 499 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 STARD3Q14849 445 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 DAZAP2Q15038 168 aaPredicted RBP3.92□□□□□ -1.78
PHC3-216ENST00000497171 IQCB1Q15051 598 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 PWP2Q15269 919 aaKnown RBP3.92□□□□□ -1.78
PHC3-216ENST00000497171 ELF2Q15723 593 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 CERKLQ49MI3 558 aaPredicted RBP3.92□□□□□ -1.78
PHC3-216ENST00000497171 ZNF618Q5T7W0 954 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 CACHD1Q5VU97 1274 aa3.92□□□□□ -1.78
PHC3-216ENST00000497171 FBXO38Q6PIJ6 1188 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms