RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SUGP1Q8IWZ8 645 aaKnown RBP6.26□□□□□ -1.41
SSR3-208ENST00000496050 C11orf44Q8N8P7 122 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 OR1N1Q8NGS0 311 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 SSH3Q8TE77 659 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 LPIN2Q92539 896 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 FKBP10Q96AY3 582 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 TRAPPC9Q96Q05 1148 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 HAPLN3Q96S86 360 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 TTPALQ9BTX7 342 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 DPCDQ9BVM2 203 aaPredicted RBP6.26□□□□□ -1.41
SSR3-208ENST00000496050 BRD8Q9H0E9 1235 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 LPAR3Q9UBY5 353 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 ZNF69Q9UC07 566 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 NFU1Q9UMS0 254 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 LZTS1Q9Y250 596 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 FER1L4A9Z1Z3 1794 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 PROM1O43490 865 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 PYGLP06737 847 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 PDHA1P08559 390 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 ZFP36P26651 326 aaKnown RBP6.25□□□□□ -1.41
SSR3-208ENST00000496050 LIPAP38571 399 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 FHL3Q13643 280 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 EFR3AQ14156 821 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 ZNF618Q5T7W0 954 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 ABHD17BQ5VST6 288 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 NFRKBQ6P4R8 1299 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 LVRNQ6Q4G3 990 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 TEX19Q8NA77 164 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 SCAMP5Q8TAC9 235 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 USP13Q92995 863 aaPredicted RBP6.25□□□□□ -1.41
SSR3-208ENST00000496050 LENG9Q96B70 501 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 WDR24Q96S15 920 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 PYM1Q9BRP8 204 aaKnown RBP6.25□□□□□ -1.41
SSR3-208ENST00000496050 ALG8Q9BVK2 526 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 GOLGA2P5Q9HBQ8 144 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 KLC4Q9NSK0 619 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 EHD3Q9NZN3 535 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 TSC22D4Q9Y3Q8 395 aa6.25□□□□□ -1.41
SSR3-208ENST00000496050 CENPVL1A0A0U1RR11 272 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 PIPSLA2A3N6 862 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 YY2O15391 372 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 PEX1O43933 1283 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 FOXD2O60548 495 aaPredicted RBP6.24□□□□□ -1.41
SSR3-208ENST00000496050 TAF5LO75529 589 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 PRKCBP05771 671 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 TMEM225BP0DP42 221 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 EGR2P11161 476 aaPredicted RBP6.24□□□□□ -1.41
SSR3-208ENST00000496050 ITGAMP11215 1152 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 KLRK1P26718 216 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 AKT1P31749 480 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 GSTM5P46439 218 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 PAPOLAP51003 745 aaKnown RBP6.24□□□□□ -1.41
SSR3-208ENST00000496050 PNLIPRP1P54315 467 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 EIF2B5Q13144 721 aaKnown RBP6.24□□□□□ -1.41
SSR3-208ENST00000496050 BMPR2Q13873 1038 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 PTPRRQ15256 657 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 RPS6KA2Q15349 733 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 ST3GAL2Q16842 350 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 P3H1Q32P28 736 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 TRIM60Q495X7 471 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 ZNF569Q5MCW4 686 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 SPDYAQ5MJ70 313 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 TREML2Q5T2D2 321 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 RNF207Q6ZRF8 634 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 NGDNQ8NEJ9 315 aaKnown RBP6.24□□□□□ -1.41
SSR3-208ENST00000496050 MYCBPAPQ8TBZ2 947 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 SOCS4Q8WXH5 440 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 OVCA2Q8WZ82 227 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 FBXL20Q96IG2 436 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 VPS50Q96JG6 964 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 EIF3CQ99613 913 aaKnown RBP6.24□□□□□ -1.41
SSR3-208ENST00000496050 C1QTNF3Q9BXJ4 246 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 NRDE2Q9H7Z3 1164 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 RIMKLBQ9ULI2 386 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 C19orf53Q9UNZ5 99 aaPredicted RBP6.24□□□□□ -1.41
SSR3-208ENST00000496050 SH2B3Q9UQQ2 575 aa6.24□□□□□ -1.41
SSR3-208ENST00000496050 HMGB1P1B2RPK0 211 aaPredicted RBP6.23□□□□□ -1.41
SSR3-208ENST00000496050 KIAA0355O15063 1070 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 NCAM2O15394 837 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 DHHO43323 396 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 LPXNO60711 386 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 WDR47O94967 919 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 CDK7P50613 346 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 DGKQP52824 942 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 PDE1AP54750 535 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 EIF4A1P60842 406 aaKnown RBP6.23□□□□□ -1.41
SSR3-208ENST00000496050 BLOC1S1P78537 153 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 CUL4BQ13620 913 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 LY6G5CQ5SRR4 150 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 MAVSQ7Z434 540 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 CLASRPQ8N2M8 674 aaKnown RBP6.23□□□□□ -1.41
SSR3-208ENST00000496050 METTL25Q8N6Q8 603 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 SUPT20HQ8NEM7 779 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 AFG1LQ8WV93 481 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 XAGE5Q8WWM1 108 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 THAP4Q8WY91 577 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 CPT1BQ92523 772 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 C3orf49Q96BT1 292 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 GPR20Q99678 358 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 AIFM2Q9BRQ8 373 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms