RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 MYO16Q9Y6X6 1858 aa20.36■□□□□ 0.85
PCOLCE-208ENST00000487172 LOC730098B7Z3J9 87 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 PAPSS1O43252 624 aaPredicted RBP20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 MRE11P49959 708 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 CDK17Q00537 523 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 TDRD12Q587J7 1177 aaKnown RBP20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 NAA35Q5VZE5 725 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 ZDHHC17Q8IUH5 632 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 SCUBE3Q8IX30 993 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 ZDHHC14Q8IZN3 488 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 TDRD5Q8NAT2 981 aaKnown RBP20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 SLC30A5Q8TAD4 765 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 CPA5Q8WXQ8 436 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 C18orf8Q96DM3 657 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 MCRS1Q96EZ8 462 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 NMUR1Q9HB89 426 aa20.35■□□□□ 0.85
PCOLCE-208ENST00000487172 A0A1W2PQH9 124 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 SSU72P8A0A1W2PR75 194 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 C2CD4DB7Z1M9 353 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 PIK3R2O00459 728 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 OLFM2O95897 454 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 OAS1P00973 400 aaKnown RBP20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 MMP8P22894 467 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 PGFP49763 221 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 GOLGA8FQ08AF8 430 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 GOLGA8DPQ0D2H9 430 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 HECTD3Q5T447 861 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 STXBP5Q5T5C0 1151 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 TXNDC8Q6A555 127 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 VPS36Q86VN1 386 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 PHF13Q86YI8 300 aaPredicted RBP20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 CMTM8Q8IZV2 173 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 MAB21L3Q8N8X9 362 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 RPGRIP1Q96KN7 1286 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 ZSWIM3Q96MP5 696 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 TRPV4Q9HBA0 871 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 SEPT11Q9NVA2 429 aaKnown RBP20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 OSER1Q9NX31 292 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 TJP2Q9UDY2 1190 aa20.34■□□□□ 0.85
PCOLCE-208ENST00000487172 C19orf67A6NJJ6 358 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 YJEFN3A6XGL0 299 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 E7ENQ6 273 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 DDX3XO00571 662 aaKnown RBP eCLIP20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 ABL1P00519 1130 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 ERBB2P04626 1255 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 GLI1P08151 1106 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 NSFP46459 744 aaKnown RBP20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 YWHAGP61981 247 aaKnown RBP eCLIP20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 ZP2Q05996 745 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 TJAP1Q5JTD0 557 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 ACAD10Q6JQN1 1059 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 KLHDC10Q6PID8 442 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 BEND5Q7L4P6 421 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 NDRG1Q92597 394 aaKnown RBP20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 VCPIP1Q96JH7 1222 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 ASB16Q96NS5 453 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 CDK5RAP1Q96SZ6 601 aaKnown RBP20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 SYNCQ9H7C4 482 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 ABCC13Q9NSE7 274 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 ASNSD1Q9NWL6 643 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 NAGPAQ9UK23 515 aa20.33■□□□□ 0.85
PCOLCE-208ENST00000487172 TRAV19A0A0A6YYK7 116 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 C2orf78A6NCI8 922 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 PLEKP08567 350 aaPredicted RBP20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 RALAP11233 206 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 RARGP13631 454 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 HDCP19113 662 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 SCNN1AP37088 669 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 GSCP56915 257 aaPredicted RBP20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 SLC6A3Q01959 620 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 PTP4A2Q12974 167 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 ZNF268Q14587 947 aaPredicted RBP20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 GSE1Q14687 1217 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 EFHC1Q5JVL4 640 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 BSPRYQ5W0U4 402 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 TOGARAM2Q6ZUX3 1019 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 ZSCAN18Q8TBC5 510 aaPredicted RBP20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 CLEC4CQ8WTT0 213 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 SMARCD2Q92925 531 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 PANX2Q96RD6 677 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 SLITRK6Q9H5Y7 841 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 WDR35Q9P2L0 1181 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 ADAMTS1Q9UHI8 967 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 STRIP2Q9ULQ0 834 aa20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 NUP210Q8TEM1 1887 aaPredicted RBP20.32■□□□□ 0.84
PCOLCE-208ENST00000487172 TLR5O60602 858 aa20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 RTN2O75298 545 aa20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 LTFP02788 710 aa20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 CALB1P05937 261 aa20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 SLC7A9P82251 487 aa20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 C1QBPQ07021 282 aaKnown RBP20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 ASTE1Q2TB18 679 aaPredicted RBP20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 FAM78AQ5JUQ0 283 aa20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 BTBD8Q5XKL5 378 aa20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 OR6B2Q6IFH4 312 aa20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 OLFML1Q6UWY5 402 aa20.31■□□□□ 0.84
PCOLCE-208ENST00000487172 FAM183BPQ6ZVS7 135 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms