RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PAPOLBQ9NRJ5 636 aaKnown RBP3.09□□□□□ -1.91
HMGN4-202ENST00000477243 TBC1D23Q9NUY8 699 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 AIPL1Q9NZN9 384 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 MARCH4Q9P2E8 410 aaPredicted RBP3.09□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF624Q9P2J8 865 aaPredicted RBP3.09□□□□□ -1.91
HMGN4-202ENST00000477243 SCOCQ9UIL1 159 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 CAMK2AQ9UQM7 478 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 BTBD3Q9Y2F9 522 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 KLHL20Q9Y2M5 609 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 MED16Q9Y2X0 877 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 ASB1Q9Y576 335 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 TRIM17Q9Y577 477 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 PCDHA1Q9Y5I3 950 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 SOS2Q07890 1332 aaPredicted RBP3.09□□□□□ -1.91
HMGN4-202ENST00000477243 PNPLA6Q8IY17 1366 aa3.09□□□□□ -1.92
HMGN4-202ENST00000477243 PIK3R4Q99570 1358 aa3.09□□□□□ -1.92
HMGN4-202ENST00000477243 ZNF518AQ6AHZ1 1483 aa3.09□□□□□ -1.92
HMGN4-202ENST00000477243 MTORP42345 2549 aa3.09□□□□□ -1.92
HMGN4-202ENST00000477243 PREX2Q70Z35 1606 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 RNF103-CHMP3A0A140T963 221 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SSU72P8A0A1W2PR75 194 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 LRRD1A4D1F6 860 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 C7orf72A4D263 438 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MEGF11A6BM72 1044 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MBD3L4A6NDZ8 208 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MBD3L3A6NE82 208 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PRR33A8MZF0 331 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MYO1GB0I1T2 1018 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 H0YC42 278 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 H3BM21 787 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PYCARD-AS1I3L0S3 204 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 RNF103O00237 685 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MCF2LO15068 1137 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SEPT4O43236 478 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SART1O43290 800 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 DYRK3O43781 588 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 KIF1CO43896 1103 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PHF2O75151 1096 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SOCS5O75159 536 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 TULP3O75386 442 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 NTSR2O95665 410 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 GGPS1O95749 300 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 THBS1P07996 1170 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PDHA1P08559 390 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MSL3P1P0C860 447 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 TXNP10599 105 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 ALAS1P13196 640 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 CDH2P19022 906 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 TFEBP19484 476 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MALP21145 153 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 KLRC1P26715 233 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 IL1R2P27930 398 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 ADSLP30566 484 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 HOXA11P31270 313 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 CD68P34810 354 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 BSGP35613 385 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 CTSKP43235 329 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 KIR3DL1P43629 444 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 ASPAP45381 313 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 KCNJ5P48544 419 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 GPC3P51654 580 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PNLIPRP1P54315 467 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 EPHA5P54756 1037 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 HDAC4P56524 1084 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PRAMEP78395 509 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 ARF5P84085 180 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 HTD2P86397 168 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 ROM1Q03395 351 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PPARAQ07869 468 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 NSUN2Q08J23 767 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 TBL3Q12788 808 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 TRIM25Q14258 630 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 RPS6KA2Q15349 733 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 INAQ16352 499 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 NTRK2Q16620 822 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 CEP55Q53EZ4 464 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PRAMEF9Q5VWM5 478 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 FYB2Q5VWT5 728 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 RRAGBQ5VZM2 374 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 NUTM2GQ5VZR2 741 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 BTBD8Q5XKL5 378 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 HMBOX1Q6NT76 420 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SHQ1Q6PI26 577 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SLC2A7Q6PXP3 512 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 CCBE1Q6UXH8 406 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 CYP2R1Q6VVX0 501 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 KCTD1Q719H9 257 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 H1FNTQ75WM6 255 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 KANSL1Q7Z3B3 1105 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 UBE3BQ7Z3V4 1068 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 ZER1Q7Z7L7 766 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 GLRX5Q86SX6 157 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 VSIG10LQ86VR7 867 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MICU3Q86XE3 530 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 CPNE8Q86YQ8 564 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 UNC5CLQ8IV45 518 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 LYSMD2Q8IV50 215 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 TRIM48Q8IWZ4 208 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PLD6Q8N2A8 252 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 CDYL2Q8N8U2 506 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms