RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CLEC9AQ6UXN8 241 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 NRSN1Q8IZ57 195 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 C11orf44Q8N8P7 122 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 B3GALNT2Q8NCR0 500 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 DVL3Q92997 716 aaPredicted RBP6.89□□□□□ -1.31
VPS50-212ENST00000476413 WDYHV1Q96HA8 205 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 TBATAQ96M53 351 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 SAYSD1Q9NPB0 183 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 KIF17Q9P2E2 1029 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 PDP2Q9P2J9 529 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 ZNF69Q9UC07 566 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 ADGRA2Q96PE1 1338 aa6.89□□□□□ -1.31
VPS50-212ENST00000476413 PNMA6EA0A0J9YXQ4 647 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 A1L4Q6 167 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 WDHD1O75717 1129 aaPredicted RBP6.88□□□□□ -1.31
VPS50-212ENST00000476413 RPP40O75818 363 aaKnown RBP6.88□□□□□ -1.31
VPS50-212ENST00000476413 PYGLP06737 847 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 EGR2P11161 476 aaPredicted RBP6.88□□□□□ -1.31
VPS50-212ENST00000476413 ZNF20P17024 532 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 CD53P19397 219 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 LIPAP38571 399 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 MAGEA10P43363 369 aaPredicted RBP6.88□□□□□ -1.31
VPS50-212ENST00000476413 GUCY1B3Q02153 619 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 ITIH3Q06033 890 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 EIF2B5Q13144 721 aaKnown RBP6.88□□□□□ -1.31
VPS50-212ENST00000476413 CUL4BQ13620 913 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 TTC22Q5TAA0 569 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 RINT1Q6NUQ1 792 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 MSANTD2Q6P1R3 559 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 RNF207Q6ZRF8 634 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 MMS22LQ6ZRQ5 1243 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 CCDC117Q8IWD4 279 aaPredicted RBP6.88□□□□□ -1.31
VPS50-212ENST00000476413 FTSJ3Q8IY81 847 aaKnown RBP6.88□□□□□ -1.31
VPS50-212ENST00000476413 SUPT20HQ8NEM7 779 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 THAP4Q8WY91 577 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 LENG9Q96B70 501 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 PTCD3Q96EY7 689 aaKnown RBP6.88□□□□□ -1.31
VPS50-212ENST00000476413 ZSCAN31Q96LW9 406 aaPredicted RBP6.88□□□□□ -1.31
VPS50-212ENST00000476413 VPS16Q9H269 839 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 GGA3Q9NZ52 723 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 DKK3Q9UBP4 350 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 TSC22D4Q9Y3Q8 395 aa6.88□□□□□ -1.31
VPS50-212ENST00000476413 A0A1B0GVC2 190 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 HMX3A6NHT5 357 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 EYA2O00167 538 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 EXOC5O00471 708 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 SNX2O60749 519 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 PEX11BO96011 259 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 JUPP14923 745 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 PCSK6P29122 969 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 PBX1P40424 430 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 CLCN2P51788 898 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 SEC24CP53992 1094 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 ADAM17P78536 824 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 CCDC70Q6NSX1 233 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 TMED8Q6PL24 325 aaPredicted RBP6.87□□□□□ -1.31
VPS50-212ENST00000476413 PIK3AP1Q6ZUJ8 805 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 CAND1Q86VP6 1230 aaKnown RBP6.87□□□□□ -1.31
VPS50-212ENST00000476413 CLASRPQ8N2M8 674 aaKnown RBP6.87□□□□□ -1.31
VPS50-212ENST00000476413 RSPRY1Q96DX4 576 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 MCRS1Q96EZ8 462 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 NAP1L4Q99733 375 aaKnown RBP6.87□□□□□ -1.31
VPS50-212ENST00000476413 EIF2AK1Q9BQI3 630 aaKnown RBP6.87□□□□□ -1.31
VPS50-212ENST00000476413 TWSG1Q9GZX9 223 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 ZCWPW1Q9H0M4 648 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 GLOD4Q9HC38 313 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 ANKFY1Q9P2R3 1169 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 USP22Q9UPT9 525 aa6.87□□□□□ -1.31
VPS50-212ENST00000476413 GXYLT2A0PJZ3 443 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 RRN3P2A6NIE6 340 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 TISP43B9A030 160 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 H0Y3Z8 333 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 SLC16A3O15427 465 aaKnown RBP6.86□□□□□ -1.31
VPS50-212ENST00000476413 IL6RP08887 468 aaPredicted RBP6.86□□□□□ -1.31
VPS50-212ENST00000476413 AKT1P31749 480 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 ZEB1P37275 1124 aaPredicted RBP6.86□□□□□ -1.31
VPS50-212ENST00000476413 NXPH1P58417 271 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 EFR3AQ14156 821 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 RALBP1Q15311 655 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 FAM110CQ1W6H9 321 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 TIGD2Q4W5G0 525 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 TMEM196Q5HYL7 178 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 NFRKBQ6P4R8 1299 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 CPOQ8IVL8 374 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 FSTL5Q8N475 847 aaPredicted RBP6.86□□□□□ -1.31
VPS50-212ENST00000476413 ASB12Q8WXK4 309 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 HERVK_113Q902F9 699 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 RUBCNQ92622 972 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 USP13Q92995 863 aaPredicted RBP6.86□□□□□ -1.31
VPS50-212ENST00000476413 FKBP10Q96AY3 582 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 CTHRC1Q96CG8 243 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 R3HDM4Q96D70 268 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 CDK5RAP1Q96SZ6 601 aaKnown RBP6.86□□□□□ -1.31
VPS50-212ENST00000476413 TRIM36Q9NQ86 728 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 TBCCD1Q9NVR7 557 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 KCTD5Q9NXV2 234 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 CNTN6Q9UQ52 1028 aa6.86□□□□□ -1.31
VPS50-212ENST00000476413 PPP6R2O75170 966 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 WDR47O94967 919 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 CER1O95813 267 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms