RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 STOML1Q9UBI4 398 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 F5H5T6 163 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 GNGT2O14610 69 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 CCR1P32246 355 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 ZNF177Q13360 481 aaPredicted RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 TAF11Q15544 211 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 TMTC4Q5T4D3 741 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 C1orf146Q5VVC0 180 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 CHADLQ6NUI6 762 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 DENND1BQ6P3S1 775 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 TMC3Q7Z5M5 1100 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 PHF13Q86YI8 300 aaPredicted RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 CDC26Q8NHZ8 85 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 AGR3Q8TD06 166 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 AENQ8WTP8 325 aaKnown RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 ELOVL4Q9GZR5 314 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 NDE1Q9NXR1 346 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 BTBD7Q9P203 1132 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 FRMD3A2A2Y4 597 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 FZD9O00144 591 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 OPLAHO14841 1288 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 B4GALT5O43286 388 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 GJB6O95452 261 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 ETFBP38117 255 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 NOL9Q5SY16 702 aaKnown RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 ANKRD23Q86SG2 305 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 DEFB106AQ8N104 65 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 HIPK4Q8NE63 616 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 SPDYE1Q8NFV5 336 aaPredicted RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 ADAM2Q99965 735 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 TRPM5Q9NZQ8 1165 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 APOC4-APOC2K7ER74 178 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 ADAMTS3O15072 1205 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 JCHAINP01591 159 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 APOC2P02655 101 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 KRT33BQ14525 404 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 IMPG1Q17R60 797 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 E2F7Q96AV8 911 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 HSFY1Q96LI6 401 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 LBHD1Q9BQE6 289 aaPredicted RBP14.27□□□□□ -0.12
BRAT1-203ENST00000467558 DYRK4Q9NR20 520 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 HES2Q9Y543 173 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 PCDHB5Q9Y5E4 795 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 COL1A2P08123 1366 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 H0Y3Z8 333 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 RBAK-RBAKDNI3L0D1 243 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 MSCO60682 206 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 PYGLP06737 847 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 NR2C2P49116 596 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 ATN1P54259 1190 aaPredicted RBP14.27□□□□□ -0.12
BRAT1-203ENST00000467558 ST8SIA6P61647 398 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 NOMO3P69849 1222 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 EFEMP1Q12805 493 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 SLC35G1Q2M3R5 365 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 TRPM8Q7Z2W7 1104 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 MTBPQ96DY7 904 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 FGD4Q96M96 766 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 MANSC1Q9H8J5 431 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 HACD3Q9P035 362 aa14.27□□□□□ -0.12
BRAT1-203ENST00000467558 MAFBQ9Y5Q3 323 aaPredicted RBP14.27□□□□□ -0.12
BRAT1-203ENST00000467558 ZNF862O60290 1169 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 LRG1P02750 347 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 GJB1P08034 283 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 MYL2P10916 166 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 ARF4P18085 180 aaPredicted RBP14.27□□□□□ -0.13
BRAT1-203ENST00000467558 MAPRE2Q15555 327 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 RABGAP1LQ5R372 815 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 EDEM1Q92611 657 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 SLC39A10Q9ULF5 831 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 SNCAIPQ9Y6H5 919 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 CNTNAP2Q9UHC6 1331 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 AHDC1Q5TGY3 1603 aaPredicted RBP14.27□□□□□ -0.13
BRAT1-203ENST00000467558 DUOX1Q9NRD9 1551 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 BTBD19C9JJ37 291 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 DNAJC6O75061 913 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 RFC1P35251 1148 aaPredicted RBP14.27□□□□□ -0.13
BRAT1-203ENST00000467558 SRLQ86TD4 932 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 SLC26A11Q86WA9 606 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 CCDC33Q8N5R6 958 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 DCUN1D1Q96GG9 259 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 DNPEPQ9ULA0 475 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 CDY2AQ9Y6F7 541 aa14.27□□□□□ -0.13
BRAT1-203ENST00000467558 H3BQF6 201 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 URODP06132 367 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 GRM5P41594 1212 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 CRYBB1P53674 252 aaPredicted RBP14.26□□□□□ -0.13
BRAT1-203ENST00000467558 DNAJC3Q13217 504 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 EFTUD2Q15029 972 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■■■■■ 29.8
BRAT1-203ENST00000467558 HABP4Q5JVS0 413 aaKnown RBP14.26□□□□□ -0.13
BRAT1-203ENST00000467558 HGSNATQ68CP4 663 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 HES6Q96HZ4 224 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 FAM161BQ96MY7 647 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 TRIM15Q9C019 465 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 CPSF2Q9P2I0 782 aaKnown RBP14.26□□□□□ -0.13
BRAT1-203ENST00000467558 FAM8A1Q9UBU6 413 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 MARCOQ9UEW3 520 aaPredicted RBP14.26□□□□□ -0.13
BRAT1-203ENST00000467558 GGT7Q9UJ14 662 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 MTO1Q9Y2Z2 717 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms