RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 L1TD1Q5T7N2 865 aaKnown RBP18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 MCTP1Q6DN14 999 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 DYMQ7RTS9 669 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 TMPRSS7Q7RTY8 843 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 DDX42Q86XP3 938 aaKnown RBP eCLIP18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 BAHD1Q8TBE0 780 aaPredicted RBP18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 OTUB2Q96DC9 234 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 HPDLQ96IR7 371 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 GABRG3Q99928 467 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 CBWD1Q9BRT8 395 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 FAM124BQ9H5Z6 455 aaPredicted RBP18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 SPHK2Q9NRA0 654 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 EHD2Q9NZN4 543 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 KIAA1522Q9P206 1035 aaPredicted RBP18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 APOBEC2Q9Y235 224 aaKnown RBP18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 DDIT3P35638 169 aa18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 RGL4Q8IZJ4 473 aa18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 MRGPRX1Q96LB2 322 aa18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 DUSP9Q99956 384 aaKnown RBP18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 MRPL45Q9BRJ2 306 aaKnown RBP18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 FGFBP2Q9BYJ0 223 aa18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 TRIM9Q9C026 710 aa18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 INTS13Q9NVM9 706 aa18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 RAD54BQ9Y620 910 aa18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 GOLGA4Q13439 2230 aaKnown RBP18.29■□□□□ 0.52
UBE2D4-209ENST00000454428 PRRT4C9JH25 899 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 GREM1O60565 184 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 GARTP22102 1010 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 BNC1Q01954 994 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 TDRD10Q5VZ19 366 aaKnown RBP18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 BTBD8Q5XKL5 378 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 KRI1Q8N9T8 703 aaKnown RBP18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 GLIS3Q8NEA6 775 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 DNASE2BQ8WZ79 361 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 DNAJC19Q96DA6 116 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 ACCSQ96QU6 501 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 ZNF518BQ9C0D4 1074 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 DPEP3Q9H4B8 488 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 TBC1D7Q9P0N9 293 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 SUSD2Q9UGT4 822 aa18.28■□□□□ 0.52
UBE2D4-209ENST00000454428 CLDN5O00501 218 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 LDHAP00338 332 aaKnown RBP18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 TMEM191BP0C7N4 346 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 IFRD2Q12894 506 aaPredicted RBP18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 MYO1EQ12965 1108 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 CAMK2BQ13554 666 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 ANO4Q32M45 955 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 DBX2Q6ZNG2 339 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 CHPFQ8IZ52 775 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 SLITRK1Q96PX8 696 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 KIF2CQ99661 725 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 ZDHHC5Q9C0B5 715 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 PCIF1Q9H4Z3 704 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 CCSER2Q9H7U1 834 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 MRPL44Q9H9J2 332 aaKnown RBP18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 EXOC7Q9UPT5 735 aa18.27■□□□□ 0.52
UBE2D4-209ENST00000454428 MAST4O15021 2626 aa18.27■□□□□ 0.51
UBE2D4-209ENST00000454428 KNL1Q8NG31 2342 aa18.27■□□□□ 0.51
UBE2D4-209ENST00000454428 SHROOM3Q8TF72 1996 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 A0A087WV48 116 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 WASH3PC4AMC7 463 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 NDUFS2O75306 463 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 C1QL1O75973 258 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 PRB1P04280 392 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 ATXN1LP0C7T5 689 aaKnown RBP18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 YWHAQP27348 245 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 LONP1P36776 959 aaKnown RBP18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 PGFP49763 221 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 CYP4F3Q08477 520 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 SYCP2LQ5T4T6 812 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 SNX30Q5VWJ9 437 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 GRAMD4Q6IC98 578 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 USP49Q70CQ1 688 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 HS2ST1Q7LGA3 356 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 FOXJ1Q92949 421 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 P2RY11Q96G91 374 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 ANKRD36BP1Q96IX9 119 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 B3GNT5Q9BYG0 378 aa18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 CHORDC1Q9UHD1 332 aaPredicted RBP18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 FNDC3AQ9Y2H6 1198 aaKnown RBP18.26■□□□□ 0.51
UBE2D4-209ENST00000454428 A0A1B0GTW7 788 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 CACNG3O60359 315 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 ZNF883P0CG24 379 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 GNSP15586 552 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 PTPN1P18031 435 aaKnown RBP18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 GNL1P36915 607 aaPredicted RBP18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 PREPLQ4J6C6 727 aaPredicted RBP18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 WDR45BQ5MNZ6 344 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 HECTD3Q5T447 861 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 NUP93Q8N1F7 819 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 ZCCHC9Q8N567 271 aaKnown RBP18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 SCAMP5Q8TAC9 235 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 SETD7Q8WTS6 366 aaKnown RBP18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 OVCA2Q8WZ82 227 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 GAREM1Q9H706 876 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 DNAJC17Q9NVM6 304 aaKnown RBP18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 IL37Q9NZH6 218 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 SEL1LQ9UBV2 794 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 SH3BP1Q9Y3L3 701 aa18.25■□□□□ 0.51
UBE2D4-209ENST00000454428 CABIN1Q9Y6J0 2220 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms