RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 CLTBP09497 229 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 ZBTB48P10074 688 aaPredicted RBP5.18□□□□□ -1.58
EPHA3-202ENST00000452448 PCYT1AP49585 367 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 MMP16P51512 607 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 RAB14P61106 215 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 SH3BP2P78314 561 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 KCNJ10P78508 379 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 SCRN3Q0VDG4 424 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 HNRNPDQ14103 355 aaKnown RBP5.18□□□□□ -1.58
EPHA3-202ENST00000452448 SCARB2Q14108 478 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 ALX1Q15699 326 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 DAB2IPQ5VWQ8 1189 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 FAM171BQ6P995 826 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 POTEGQ6S5H5 508 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 TRIM72Q6ZMU5 477 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 CATSPERGQ6ZRH7 1159 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 UNC45BQ8IWX7 931 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 MFSD2AQ8NA29 543 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 STKLD1Q8NE28 680 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 PDZD8Q8NEN9 1154 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 ANGPTL6Q8NI99 470 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 CEP76Q8TAP6 659 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 IFI44Q8TCB0 444 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 LRRC8CQ8TDW0 803 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 TRIM43Q96BQ3 446 aaPredicted RBP5.18□□□□□ -1.58
EPHA3-202ENST00000452448 REXO5Q96IC2 774 aaKnown RBP5.18□□□□□ -1.58
EPHA3-202ENST00000452448 SDF4Q9BRK5 362 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 NUP85Q9BW27 656 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 BBS2Q9BXC9 721 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 PACSIN1Q9BY11 444 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 AAASQ9NRG9 546 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 NRBP2Q9NSY0 501 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 AKAP7Q9P0M2 348 aaPredicted RBP5.18□□□□□ -1.58
EPHA3-202ENST00000452448 CPSF3Q9UKF6 684 aaKnown RBP5.18□□□□□ -1.58
EPHA3-202ENST00000452448 SPATA2Q9UM82 520 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 SAMM50Q9Y512 469 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 COMMD3-BMI1R4GMX3 469 aa5.18□□□□□ -1.58
EPHA3-202ENST00000452448 NOS1P29475 1434 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ADGRB1O14514 1584 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 TRBV23OR9-2A0A075B6M9 112 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 FAM83GA6ND36 823 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 EFCAB8A8MWE9 144 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 TARM1B6A8C7 271 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 FSCN2O14926 492 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 DYNC1LI2O43237 492 aaPredicted RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 NDUFA2O43678 99 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ADAM23O75077 832 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 SNRPA1P09661 255 aaKnown RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ANPEPP15144 967 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 PDE6AP16499 860 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 HDCP19113 662 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 TCEA1P23193 301 aaKnown RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 GNA11P29992 359 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 HOXD13P35453 343 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 KRT6CP48668 564 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ALDH5A1P51649 535 aaPredicted RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 KRT76Q01546 638 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 RAPSNQ13702 412 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 GALNT3Q14435 633 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 SMU1Q2TAY7 513 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ODF2Q5BJF6 829 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 COX20Q5RI15 118 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ZNF425Q6IV72 752 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ANO7Q6IWH7 933 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 LRIG3Q6UXM1 1119 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 COMTD1Q86VU5 262 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 CCNJLQ8IV13 435 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 TRMT44Q8IYL2 757 aaKnown RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 FBXL16Q8N461 479 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ZGPATQ8N5A5 531 aaKnown RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 GPR161Q8N6U8 529 aaKnown RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ZNF507Q8TCN5 953 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ADAMTS16Q8TE57 1224 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 PTPRN2Q92932 1015 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ZNF274Q96GC6 653 aaPredicted RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 DNAJC1Q96KC8 554 aaKnown RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 ADAD1Q96M93 576 aaKnown RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 CLUHP3Q96NS8 147 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 RPRD1AQ96P16 312 aaPredicted RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 OPALINQ96PE5 141 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 PKP4Q99569 1192 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 FTOQ9C0B1 505 aaKnown RBP eCLIP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 SP110Q9HB58 689 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 SPACA1Q9HBV2 294 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 MAN1C1Q9NR34 630 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 TMPRSS4Q9NRS4 437 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 DTLQ9NZJ0 730 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 COQ3Q9NZJ6 369 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 CYB5R1Q9UHQ9 305 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 SALL4Q9UJQ4 1053 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 KCNH4Q9UQ05 1017 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 AHDC1Q5TGY3 1603 aaPredicted RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 MSH6P52701 1360 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 UGGT1Q9NYU2 1555 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 CLTCQ00610 1675 aaKnown RBP5.17□□□□□ -1.58
EPHA3-202ENST00000452448 QRICH2Q9H0J4 1663 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 A0A088AWK7 358 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 A0A1B0GVC2 190 aa5.17□□□□□ -1.58
EPHA3-202ENST00000452448 WDR91A4D1P6 747 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms