RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 IL31RAQ8NI17 732 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 IFT122Q9HBG6 1241 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 KCNH7Q9NS40 1196 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 BOLA2-SMG1P6H3BVE0 249 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 CCNT2O60583 730 aaKnown RBP14.49□□□□□ -0.09
VPS52-212ENST00000445902 IL1BP01584 269 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 PIM1P11309 404 aaPredicted RBP14.49□□□□□ -0.09
VPS52-212ENST00000445902 AOC1P19801 751 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 SLC5A2P31639 672 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 ACOT2P49753 483 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 SNAPC2Q13487 334 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 TDRD10Q5VZ19 366 aaKnown RBP14.49□□□□□ -0.09
VPS52-212ENST00000445902 LRRC8BQ6P9F7 803 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 B3GNT9Q6UX72 402 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 NPNTQ6UXI9 565 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 ENOSF1Q7L5Y1 443 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 KMT5AQ9NQR1 393 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 SIRPGQ9P1W8 387 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 PCSK1NQ9UHG2 260 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 EXOC7Q9UPT5 735 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 A0A0B4J269 797 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 DNAJA2O60884 412 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 SIN3BO75182 1162 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 RPS6KA4O75676 772 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 SNRPAP09012 282 aaKnown RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 MAPTP10636 758 aaKnown RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 ACO1P21399 889 aaKnown RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 EMP3P54852 163 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 RPL10AP62906 217 aaKnown RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 MYBPC1Q00872 1141 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 PLOD1Q02809 727 aaPredicted RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 PPP6R3Q5H9R7 873 aaPredicted RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 C6orf52Q5T4I8 152 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 C1QTNF12Q5T7M4 302 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 GALNT4Q8N4A0 578 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 TTC13Q8NBP0 860 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 TMC2Q8TDI7 906 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 EPB41L1Q9H4G0 881 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 SMYD2Q9NRG4 433 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 ZNF232Q9UNY5 417 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 COL14A1Q05707 1796 aaKnown RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 H0YIN7 160 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 NDC80O14777 642 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 RFPL1O75677 317 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 KRT37O76014 449 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 MAP3K6O95382 1288 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 CRTAMO95727 393 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 VIL1P09327 827 aaKnown RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 SRGAP2CP0DJJ0 459 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 SRGAP2BP0DMP2 458 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 KCNA4P22459 653 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 IL1R2P27930 398 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 QARSP47897 775 aaKnown RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 EIF3EP60228 445 aaKnown RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 CBX3Q13185 183 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 DPYSL3Q14195 570 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 PDK1Q15118 436 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 TAF5Q15542 800 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 FRMD7Q6ZUT3 714 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 SH3BP5LQ7L8J4 393 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 RFX6Q8HWS3 928 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 GPD1LQ8N335 351 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 SENP6Q9GZR1 1112 aaPredicted RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 RBM38Q9H0Z9 239 aaKnown RBP14.48□□□□□ -0.09
VPS52-212ENST00000445902 BTBD7Q9P203 1132 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 CIDEBQ9UHD4 219 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 TEX264Q9Y6I9 313 aa14.48□□□□□ -0.09
VPS52-212ENST00000445902 SIPA1L1O43166 1804 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 CD1EP15812 388 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 NELFEP18615 380 aaKnown RBP14.47□□□□□ -0.09
VPS52-212ENST00000445902 ITGAXP20702 1163 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 STAT2P52630 851 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
VPS52-212ENST00000445902 DMP1Q13316 513 aaPredicted RBP14.47□□□□□ -0.09
VPS52-212ENST00000445902 TUBB3Q13509 450 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 DCTN2Q13561 401 aaKnown RBP14.47□□□□□ -0.09
VPS52-212ENST00000445902 CUL2Q13617 745 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 AOC3Q16853 763 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 ANO5Q75V66 913 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 AMIGO2Q86SJ2 522 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 MAP4K3Q8IVH8 894 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 GMCL1Q96IK5 515 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 CSRNP1Q96S65 589 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 APOBEC2Q9Y235 224 aaKnown RBP14.47□□□□□ -0.09
VPS52-212ENST00000445902 TTLL3Q9Y4R7 772 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 AP4B1Q9Y6B7 739 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 CROCCQ5TZA2 2017 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 ZNF536O15090 1300 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 C3orf70A6NLC5 250 aaPredicted RBP14.47□□□□□ -0.09
VPS52-212ENST00000445902 RBP3P10745 1247 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 TBCCQ15814 346 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 TATDN1Q6P1N9 297 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 KLHL35Q6PF15 583 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 PHTF2Q8N3S3 785 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 ZNF606Q8WXB4 792 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 TEKT1Q969V4 418 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 CALN1Q9BXU9 219 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 HOMER2Q9NSB8 354 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 PNPOQ9NVS9 261 aa14.47□□□□□ -0.09
VPS52-212ENST00000445902 E2F8A0AVK6 867 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms