RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 CTAGE9A4FU28 777 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 OR6C75A6NL08 312 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 HCRTO43612 131 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 BUB1O43683 1085 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 CCDC130P13994 396 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 RRM1P23921 792 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 ACAT1P24752 427 aaKnown RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 TKTP29401 623 aaKnown RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 CASQ1P31415 396 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 ACADSBP45954 432 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 NOP2P46087 812 aaKnown RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 PLA2G4AP47712 749 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 RPL34P49207 117 aaKnown RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 ATXN1P54253 815 aaKnown RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 PSMC1P62191 440 aaKnown RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 ZNF268Q14587 947 aaPredicted RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 PTPN20Q4JDL3 420 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 MDH1BQ5I0G3 518 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 KIAA0319Q5VV43 1072 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 ZNF280DQ6N043 979 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 OTOP3Q7RTS5 596 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 SLFN11Q7Z7L1 901 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 TMEM173Q86WV6 379 aaPredicted RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 DNAAF5Q86Y56 855 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 RNF168Q8IYW5 571 aaPredicted RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 FUKQ8N0W3 1084 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 VPS52Q8N1B4 723 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 LRRC57Q8N9N7 239 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 ST13P5Q8NFI4 369 aaPredicted RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 ZNF564Q8TBZ8 553 aaPredicted RBP12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 SLC2A14Q8TDB8 520 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 SLC22A17Q8WUG5 538 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 SLC35F5Q8WV83 523 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 C18orf8Q96DM3 657 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 IGSF21Q96ID5 467 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 HSFY1Q96LI6 401 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 SLC4A5Q9BY07 1137 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 TBC1D17Q9HA65 648 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 JRKLQ9Y4A0 524 aa12.34□□□□□ -0.43
AC009404.1-202ENST00000439955 VWA8A3KMH1 1905 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 MYO10Q9HD67 2058 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 DCDC2BA2VCK2 349 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 H7C4K7 107 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 XPO1O14980 1071 aaKnown RBP12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 SCNN1AP37088 669 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 PDE4CQ08493 712 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 SMARCB1Q12824 385 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 FAM171A1Q5VUB5 890 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 ZC3H14Q6PJT7 736 aaKnown RBP12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 ANKS3Q6ZW76 656 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 GPR149Q86SP6 731 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 TMEM110Q86TL2 294 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 FAM35AQ86V20 835 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 ZDHHC17Q8IUH5 632 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 GPR65Q8IYL9 337 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 DCP1BQ8IZD4 617 aaKnown RBP12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 SUMF1Q8NBK3 374 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 OR10T2Q8NGX3 314 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 UBA3Q8TBC4 463 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 SMARCD1Q96GM5 515 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 PCED1BQ96HM7 432 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 CPXM1Q96SM3 734 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 NUP85Q9BW27 656 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 DUSP16Q9BY84 665 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 B3GNT5Q9BYG0 378 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 GPR62Q9BZJ7 368 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 UBXN6Q9BZV1 441 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 ZCWPW1Q9H0M4 648 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 SYNCQ9H7C4 482 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 OSGEPQ9NPF4 335 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 CYTH4Q9UIA0 394 aa12.33□□□□□ -0.44
AC009404.1-202ENST00000439955 MYBPHLA2RUH7 354 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 FANCGO15287 622 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 ATP2C2O75185 946 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 PALMO75781 387 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 FAM200BP0CF97 657 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 ADORA2BP29275 332 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 MAMLD1Q13495 774 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 NFE2Q16621 373 aaPredicted RBP12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 PPP1R15BQ5SWA1 713 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 PAPD7Q5XG87 772 aaKnown RBP12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 DNAJC24Q6P3W2 148 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 C4orf50Q6ZRC1 276 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 PAQR9Q6ZVX9 377 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 XYLT1Q86Y38 959 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 C1orf210Q8IVY1 113 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 BCL7CQ8WUZ0 217 aaPredicted RBP12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 KCTD13Q8WZ19 329 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 MYLPFQ96A32 169 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 MCRS1Q96EZ8 462 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 TMEM169Q96HH4 297 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 FUBP3Q96I24 572 aaKnown RBP eCLIP12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 MED10Q9BTT4 135 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 TTPALQ9BTX7 342 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms