RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 PIH1D1Q9NWS0 290 aaKnown RBP17.28■□□□□ 0.36
PKP4-204ENST00000421462 SLC17A6Q9P2U8 582 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 HEMK1Q9Y5R4 338 aaPredicted RBP17.28■□□□□ 0.36
PKP4-204ENST00000421462 MAPTP10636 758 aaKnown RBP17.28■□□□□ 0.36
PKP4-204ENST00000421462 MMP8P22894 467 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 SLC18A2Q05940 514 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 B3GNT9Q6UX72 402 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.28■□□□□ 0.36
PKP4-204ENST00000421462 HSFX1Q9UBD0 423 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 APOBEC2Q9Y235 224 aaKnown RBP17.28■□□□□ 0.36
PKP4-204ENST00000421462 TELO2Q9Y4R8 837 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 HEY1Q9Y5J3 304 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 ZNF536O15090 1300 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 MCF2LO15068 1137 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 NELFEP18615 380 aaKnown RBP17.27■□□□□ 0.36
PKP4-204ENST00000421462 COPAP53621 1224 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 C1QBPQ07021 282 aaKnown RBP17.27■□□□□ 0.36
PKP4-204ENST00000421462 TLR1Q15399 786 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 NADK2Q4G0N4 442 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 ANO5Q75V66 913 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 GLIS2Q9BZE0 524 aaPredicted RBP17.27■□□□□ 0.36
PKP4-204ENST00000421462 XPNPEP1Q9NQW7 623 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 TMCO1Q9UM00 188 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 LZTS1Q9Y250 596 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 DTNAQ9Y4J8 743 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 PMM2O15305 246 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 CPOXP36551 454 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 TMEM62Q0P6H9 643 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 ACBD5Q5T8D3 534 aaPredicted RBP17.27■□□□□ 0.36
PKP4-204ENST00000421462 TRMT10BQ6PF06 316 aaKnown RBP17.27■□□□□ 0.36
PKP4-204ENST00000421462 KLHDC10Q6PID8 442 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 HHIPL2Q6UWX4 724 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 TTLL6Q8N841 843 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 ACSS2Q9NR19 701 aa17.27■□□□□ 0.36
PKP4-204ENST00000421462 CLRN2A0PK11 232 aa17.27■□□□□ 0.35
PKP4-204ENST00000421462 CNGA3Q16281 694 aa17.27■□□□□ 0.35
PKP4-204ENST00000421462 ZACNQ401N2 412 aa17.27■□□□□ 0.35
PKP4-204ENST00000421462 ANKRD20A4Q4UJ75 823 aa17.27■□□□□ 0.35
PKP4-204ENST00000421462 TATDN1Q6P1N9 297 aa17.27■□□□□ 0.35
PKP4-204ENST00000421462 WDR75Q8IWA0 830 aaKnown RBP17.27■□□□□ 0.35
PKP4-204ENST00000421462 AGO4Q9HCK5 861 aaKnown RBP17.27■□□□□ 0.35
PKP4-204ENST00000421462 SMYD2Q9NRG4 433 aa17.27■□□□□ 0.35
PKP4-204ENST00000421462 PNPOQ9NVS9 261 aa17.27■□□□□ 0.35
PKP4-204ENST00000421462 RBAKQ9NYW8 714 aaPredicted RBP17.27■□□□□ 0.35
PKP4-204ENST00000421462 SCAF8Q9UPN6 1271 aaKnown RBP17.27■□□□□ 0.35
PKP4-204ENST00000421462 TDRKHQ9Y2W6 561 aaKnown RBP17.27■□□□□ 0.35
PKP4-204ENST00000421462 ZNF541Q9H0D2 1346 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 SERPINA6P08185 405 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 CDO1Q16878 200 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 MAP7D3Q8IWC1 876 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 UNC5BQ8IZJ1 945 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 STKLD1Q8NE28 680 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 DGCR14Q96DF8 476 aaKnown RBP17.26■□□□□ 0.35
PKP4-204ENST00000421462 CLMNQ96JQ2 1002 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 GPAMQ9HCL2 828 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 CDH22Q9UJ99 828 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 POMPQ9Y244 141 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 CCNE2O96020 404 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 MRPS9P82933 396 aaKnown RBP17.26■□□□□ 0.35
PKP4-204ENST00000421462 CYTH1Q15438 398 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 FASTKD1Q53R41 847 aaKnown RBP17.26■□□□□ 0.35
PKP4-204ENST00000421462 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
PKP4-204ENST00000421462 TRIM72Q6ZMU5 477 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 SH2D5Q6ZV89 423 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 KIAA0319LQ8IZA0 1049 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 C7orf26Q96N11 449 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 LIN28AQ9H9Z2 209 aaKnown RBP17.26■□□□□ 0.35
PKP4-204ENST00000421462 GABBR1Q9UBS5 961 aa17.26■□□□□ 0.35
PKP4-204ENST00000421462 SEPT9Q9UHD8 586 aaPredicted RBP17.26■□□□□ 0.35
PKP4-204ENST00000421462 AGO2Q9UKV8 859 aaKnown RBP17.26■□□□□ 0.35
PKP4-204ENST00000421462 WDR64B1ANS9 1081 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 CFLARO15519 480 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 DCXO43602 365 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 PEX1O43933 1283 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 DGKIO75912 1065 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 TMCC1O94876 653 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 CSH1P0DML2 217 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 CSH2P0DML3 217 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 TBL3Q12788 808 aaKnown RBP17.25■□□□□ 0.35
PKP4-204ENST00000421462 BSPRYQ5W0U4 402 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 TMC7Q7Z402 723 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 ZNF711Q9Y462 761 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 MYO18AQ92614 2054 aaKnown RBP17.25■□□□□ 0.35
PKP4-204ENST00000421462 XIRP1Q702N8 1843 aaKnown RBP17.25■□□□□ 0.35
PKP4-204ENST00000421462 VILLO15195 856 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 ZSCAN9O15535 394 aaPredicted RBP17.25■□□□□ 0.35
PKP4-204ENST00000421462 CST3P01034 146 aaPredicted RBP17.25■□□□□ 0.35
PKP4-204ENST00000421462 C4BPAP04003 597 aaKnown RBP17.25■□□□□ 0.35
PKP4-204ENST00000421462 KRT3P12035 628 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 KDELR1P24390 212 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 PCSK6P29122 969 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 UBAP1Q9NZ09 502 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 EP400Q96L91 3159 aa17.25■□□□□ 0.35
PKP4-204ENST00000421462 LRRIQ4A6NIV6 560 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 E9PBE3 544 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 AIM2O14862 343 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 KCNN4O15554 427 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 KLHL41O60662 606 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 SIN3BO75182 1162 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 LRCH4O75427 683 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms