RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ABHD2P08910 425 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 CTGFP29279 349 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 SSTR1P30872 391 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 SLC6A3Q01959 620 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 TAF1CQ15572 869 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 HIF1AQ16665 826 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 TMEM110Q86TL2 294 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 PLD5Q8N7P1 536 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 MAML1Q92585 1016 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 ACTR5Q9H9F9 607 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 ETAA1Q9NY74 926 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 IPPQ9Y573 584 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 ZNF638Q14966 1978 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 MCF2LO15068 1137 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 ATP2C2O75185 946 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 LCP1P13796 627 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 AFF1P51825 1210 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 BASP1P80723 227 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 STAT4Q14765 748 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 NOMO1Q15155 1222 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 TAX1BP1Q86VP1 789 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 OSTM1Q86WC4 334 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 RASAL3Q86YV0 1011 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 SLC2A14Q8TDB8 520 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 RSAD1Q9HA92 442 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 PCDH18Q9HCL0 1135 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 KIAA1257Q9ULG3 409 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 UBQLN1Q9UMX0 589 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 TRPM7Q96QT4 1865 aa15.83■□□□□ 0.13
SCAMP4-202ENST00000409472 KPNA7A9QM74 516 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 SPAG7O75391 227 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 VIMP08670 466 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 RABGGTBP53611 331 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 ACAP1Q15027 740 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 PKN2Q16513 984 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 GKAP1Q5VSY0 366 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 IGDCC3Q8IVU1 814 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 CACNA2D3Q8IZS8 1091 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 TTC13Q8NBP0 860 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 PCDH19Q8TAB3 1148 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 ZNF483Q8TF39 744 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 USP6NLQ92738 828 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 WNT8BQ93098 351 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 CCDC134Q9H6E4 229 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 HEY1Q9Y5J3 304 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 DPYSL4O14531 572 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 ALOX15BO15296 676 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 ACAT1P24752 427 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 SDC4P31431 198 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 INHBEP58166 350 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 KRT81Q14533 505 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 PPP6R3Q5H9R7 873 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 FAXCQ5TGI0 409 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 CENPUQ71F23 418 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 PPIL6Q8IXY8 311 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 AGGF1Q8N302 714 aaeCLIP15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 RNF157Q96PX1 679 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 FOXP3Q9BZS1 431 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 SLC40A1Q9NP59 571 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 BATF3Q9NR55 127 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 FGFR1OP2Q9NVK5 253 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 HESX1Q9UBX0 185 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 MFHAS1Q9Y4C4 1052 aa15.83■□□□□ 0.12
SCAMP4-202ENST00000409472 TCP11X1B4DZS4 312 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 RASA4BC9J798 803 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 PTGESO14684 152 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 RASA4O43374 803 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 GCKP35557 465 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 ROR1Q01973 937 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 NAA25Q14CX7 972 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 SMYD5Q6GMV2 418 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 PARP9Q8IXQ6 854 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 TRPV1Q8NER1 839 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 RSRC1Q96IZ7 334 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 ELAC2Q9BQ52 826 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 NMRK2Q9NPI5 230 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 XPO7Q9UIA9 1087 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 NR2E3Q9Y5X4 410 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 CLDN5O00501 218 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 AVILO75366 819 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 GBP2P32456 591 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 CCNHP51946 323 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 PITX1P78337 314 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 STILQ15468 1287 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 ARHGAP17Q68EM7 881 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 DARS2Q6PI48 645 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 FAM43BQ6ZT52 329 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 FAM228AQ86W67 206 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 C4orf33Q8N1A6 199 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 TTC39CQ8N584 583 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 NETO2Q8NC67 525 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 FBXO36Q8NEA4 188 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 DYDC1Q8WWB3 177 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 P3H4Q92791 437 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 ITFG2Q969R8 447 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 TMPRSS4Q9NRS4 437 aa15.82■□□□□ 0.12
SCAMP4-202ENST00000409472 BEST1O76090 585 aa15.81■□□□□ 0.12
SCAMP4-202ENST00000409472 GNL1P36915 607 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-202ENST00000409472 ZNF157P51786 506 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-202ENST00000409472 PURAQ00577 322 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms