RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 B3GNT5Q9BYG0 378 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 ULBP1Q9BZM6 244 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 DCTN4Q9UJW0 460 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 DSEQ9UL01 958 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 C3orf70A6NLC5 250 aaPredicted RBP14.58□□□□□ -0.08
SCAF4-202ENST00000399804 RIPK2O43353 540 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 PQBP1O60828 265 aaKnown RBP14.58□□□□□ -0.08
SCAF4-202ENST00000399804 CYP1A1P04798 512 aaPredicted RBP14.58□□□□□ -0.08
SCAF4-202ENST00000399804 TYK2P29597 1187 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 VEPH1Q14D04 833 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 KDM7AQ6ZMT4 941 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 PDCD6IPQ8WUM4 868 aaKnown RBP14.58□□□□□ -0.08
SCAF4-202ENST00000399804 STMN2Q93045 179 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 LHX5Q9H2C1 402 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 SLC45A1Q9Y2W3 748 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 TRIM17Q9Y577 477 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 ZC3H4Q9UPT8 1303 aaKnown RBP14.58□□□□□ -0.08
SCAF4-202ENST00000399804 DNALI1O14645 258 aaPredicted RBP14.58□□□□□ -0.08
SCAF4-202ENST00000399804 CFHP08603 1231 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 C1orf220Q5T0J3 134 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 ZNF473Q8WTR7 871 aaKnown RBP14.58□□□□□ -0.08
SCAF4-202ENST00000399804 STRA6Q9BX79 667 aa14.58□□□□□ -0.08
SCAF4-202ENST00000399804 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.58□□□□□ -0.08
SCAF4-202ENST00000399804 PTPRJQ12913 1337 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 FAM47DPA6NHR8 397 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 ERBB2P04626 1255 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 POU5F1BQ06416 359 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 GRB14Q14449 540 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 C10orf120Q5SQS8 335 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 MAML1Q92585 1016 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 PGLYRP2Q96PD5 576 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 UBN1Q9NPG3 1134 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 MORF4L1Q9UBU8 362 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 LAMB2P55268 1798 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 DDX60LQ5H9U9 1706 aaKnown RBP14.57□□□□□ -0.08
SCAF4-202ENST00000399804 TMEM88BA6NKF7 163 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 APOC4-APOC2K7ER74 178 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 CLDN5O00501 218 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 APOC2P02655 101 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 ASGR1P07306 291 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 USP17L7P0C7H9 530 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 TNFRSF8P28908 595 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 DENND5BQ6ZUT9 1274 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 SDCCAG8Q86SQ7 713 aaPredicted RBP14.57□□□□□ -0.08
SCAF4-202ENST00000399804 IFNL1Q8IU54 200 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 SLC4A11Q8NBS3 891 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 HSFY1Q96LI6 401 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 NUDCD1Q96RS6 583 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 STYXL1Q9Y6J8 313 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 PMLP29590 882 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 MMRN1Q13201 1228 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 PTK7Q13308 1070 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 PTK6Q13882 451 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 RCN2Q14257 317 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 DEFB128Q7Z7B8 93 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 OR6P1Q8NGX9 317 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 SEPT8Q92599 483 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 R3HDM2Q9Y2K5 976 aaKnown RBP14.57□□□□□ -0.08
SCAF4-202ENST00000399804 MYH10P35580 1976 aa14.57□□□□□ -0.08
SCAF4-202ENST00000399804 CIB2O75838 187 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 SYF2O95926 243 aaKnown RBP14.56□□□□□ -0.08
SCAF4-202ENST00000399804 ALDH2P05091 517 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 NPR3P17342 541 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 DRG2P55039 364 aaKnown RBP14.56□□□□□ -0.08
SCAF4-202ENST00000399804 NFE2Q16621 373 aaPredicted RBP14.56□□□□□ -0.08
SCAF4-202ENST00000399804 MAP7D1Q3KQU3 841 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 OLFML2BQ68BL8 750 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 CEP41Q9BYV8 373 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 PFDN6O15212 129 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 ATG16L1Q676U5 607 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 TAPT1Q6NXT6 567 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 ZNF449Q6P9G9 518 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 LCLAT1Q6UWP7 414 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 MCUQ8NE86 351 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 SMARCD1Q96GM5 515 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 TRIM55Q9BYV6 548 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 PPP1R12CQ9BZL4 782 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 SMG5Q9UPR3 1016 aaKnown RBP14.56□□□□□ -0.08
SCAF4-202ENST00000399804 SHOC2Q9UQ13 582 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 DCDC2CA8MYV0 355 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 PAMP19021 973 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 CDCA2Q69YH5 1023 aaPredicted RBP14.56□□□□□ -0.08
SCAF4-202ENST00000399804 IFT43Q96FT9 208 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 DERAQ9Y315 318 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 LIASO43766 372 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 CNMDO75829 334 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 GSTA1P08263 222 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 GSTA2P09210 222 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 GJA5P36382 358 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 FLT3P36888 993 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 NUMBP49757 651 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 GEMIN4P57678 1058 aaKnown RBP14.56□□□□□ -0.08
SCAF4-202ENST00000399804 HIBCHQ6NVY1 386 aaPredicted RBP14.56□□□□□ -0.08
SCAF4-202ENST00000399804 NPNTQ6UXI9 565 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 ARHGAP24Q8N264 748 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 TMEM86AQ8N2M4 240 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 VPS39Q96JC1 886 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 PWWP2AQ96N64 755 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 CATSPERBQ9H7T0 1116 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 GGT7Q9UJ14 662 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms