RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 NMD3Q96D46 503 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 PRKAG2Q9UGJ0 569 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 RNF112Q9ULX5 631 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 AKT1P31749 480 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 CLEC16AQ2KHT3 1053 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 GOLGA7BQ2TAP0 167 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 TMC5Q6UXY8 1006 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 DCP1BQ8IZD4 617 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 EID3Q8N140 333 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 RPAP3Q9H6T3 665 aaPredicted RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 RSL24D1Q9UHA3 163 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 ITM2BQ9Y287 266 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 TPBGLP0DKB5 382 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 CRABP2P29373 138 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 C21orf59P57076 290 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 TROAPQ12815 778 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 DDR2Q16832 855 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 Q4G0T1 1027 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 ZDHHC17Q8IUH5 632 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 AADATQ8N5Z0 425 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
SNX1-202ENST00000380285 TDRD3Q9H7E2 651 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 DMGDHQ9UI17 866 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 ACOT9Q9Y305 439 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 ADGRA2Q96PE1 1338 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 BTNL10A8MVZ5 291 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 WFS1O76024 890 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 PRKCEQ02156 737 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 ARHGEF7Q14155 803 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 IPMKQ8NFU5 416 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 RRN3Q9NYV6 651 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 FOXN3O00409 490 aaPredicted RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 HBP1O60381 514 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 CYP2C9P11712 490 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 OVGP1Q12889 678 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 DCAF6Q58WW2 860 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 DEFB107AQ8IZN7 70 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 ZCCHC7Q8N3Z6 543 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 ZFP42Q96MM3 310 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 KLF6Q99612 283 aaPredicted RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.88□□□□□ -0.83
SNX1-202ENST00000380285 AFF2P51816 1311 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 RRN3P2A6NIE6 340 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 NDUFB10O96000 172 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 NAMPTP43490 491 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 PPP4CP60510 307 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 CDK16Q00536 496 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ROR2Q01974 943 aaKnown RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 CYP51A1Q16850 503 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ARMC4Q5T2S8 1044 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ARMC3Q5W041 872 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ARHGAP17Q68EM7 881 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 TLK2Q86UE8 772 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 CYP4Z2PQ8N1L4 340 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 SNRNP27Q8WVK2 155 aaKnown RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 DMAP1Q9NPF5 467 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 RUVBL2Q9Y230 463 aaKnown RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 PTPN7P35236 360 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 SLC1A6P48664 564 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 RPS6P62753 249 aaKnown RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 GRB10Q13322 594 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 NDUFA5Q16718 116 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 KCNT1Q5JUK3 1230 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 SPANXN3Q5MJ09 141 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 KCTD14Q9BQ13 255 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 UBDO15205 165 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 ME2P23368 584 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 MAGEA10P43363 369 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 ADARP55265 1226 aaKnown RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 FOXD4Q12950 439 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 NFYCQ13952 458 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ZC2HC1CQ53FD0 456 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 ZNF544Q6NX49 715 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 NOTUMQ6P988 496 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 STARD8Q92502 1023 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 LRRIQ1Q96JM4 1722 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 CPNE1Q99829 537 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 PRKD2Q9BZL6 878 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 AVENQ9NQS1 362 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 ATMINO43313 823 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 KRT6BP04259 564 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 RASA1P20936 1047 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 KRT6CP48668 564 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 SPANXN2Q5MJ10 180 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 SPOCD1Q6ZMY3 1216 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ATP6V0D2Q8N8Y2 350 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 PABPC5Q96DU9 382 aaKnown RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 JMJD4Q9H9V9 463 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 MBD2Q9UBB5 411 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 PRR12Q9ULL5 1215 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 TMCO1Q9UM00 188 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ZNF862O60290 1169 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 IL12RB1P42701 662 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 DRG2P55039 364 aaKnown RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 MSLNQ13421 630 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 SMTNL2Q2TAL5 461 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ATP6AP1LQ52LC2 224 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 PACS2Q86VP3 889 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 OR6Y1Q8NGX8 325 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms