RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TAS2R42Q7RTR8 314 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PPP2R3CQ969Q6 453 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 CNDP1Q96KN2 507 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 BTBD10Q9BSF8 475 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 RRAGCQ9HB90 399 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 NDFIP2Q9NV92 336 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 NINJ2Q9NZG7 142 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PCYOX1Q9UHG3 505 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 FRMPD4Q14CM0 1322 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 DAB1O75553 588 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 F9P00740 461 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 NUDT17P0C025 328 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 KCNK10P57789 538 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 FKBP1AP62942 108 aaKnown RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 KCNA1Q09470 495 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 MIIPQ5JXC2 388 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 SNX30Q5VWJ9 437 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 EFCAB12Q6NXP0 572 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 TTC33Q6PID6 262 aaPredicted RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 WDR49Q8IV35 697 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 RIN3Q8TB24 985 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 STK32AQ8WU08 396 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 AFG1LQ8WV93 481 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 CKAP2Q8WWK9 683 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 TBCBQ99426 244 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 DDX50Q9BQ39 737 aaKnown RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 KLHL4Q9C0H6 718 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 CAAP1Q9H8G2 361 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 ZNF229Q9UJW7 825 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 CNTNAP1P78357 1384 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 GLTPD2A6NH11 291 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 ALBP02768 609 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 PSMC3P17980 439 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 GNL1P36915 607 aaPredicted RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 RARRES1P49788 294 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 CCDC92Q53HC0 331 aaPredicted RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 SLC45A4Q5BKX6 768 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 SEL1L3Q68CR1 1132 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 DENND1BQ6P3S1 775 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 ADGRA3Q8IWK6 1321 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 EFHBQ8N7U6 833 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 TNIP2Q8NFZ5 429 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 CYGBQ8WWM9 190 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 OTUD5Q96G74 571 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 TRIM45Q9H8W5 580 aaPredicted RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 FBXO28Q9NVF7 368 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 VPS9D1Q9Y2B5 631 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 DNAJC16Q9Y2G8 782 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 M0R3G1 203 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 BNIP3LO60238 219 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 ITGB3P05106 788 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 CPA3P15088 417 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 ATP6V1B1P15313 513 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 CAP2P40123 477 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 ZNF280AP59817 542 aaPredicted RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 RNF219Q5W0B1 726 aaPredicted RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 IRGCQ6NXR0 463 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 NUP93Q8N1F7 819 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 BAP1Q92560 729 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 ATG4CQ96DT6 458 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 PRPF18Q99633 342 aaKnown RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 RBBP8Q99708 897 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 NUDT12Q9BQG2 462 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 CISHQ9NSE2 258 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 TEKT2Q9UIF3 430 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 USP18Q9UMW8 372 aa8.67□□□□□ -1.02
VPS36-201ENST00000378060 UBQLN1Q9UMX0 589 aaKnown RBP8.67□□□□□ -1.02
VPS36-201ENST00000378060 ADM5C9JUS6 153 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ZBTB39O15060 712 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 CYTH3O43739 400 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 CLPTM1O96005 669 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 SUPT20HL2P0C7V6 817 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 TCN1P20061 433 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 ATICP31939 592 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ELF3P78545 371 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 MGAT5Q09328 741 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ACAP1Q15027 740 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 MTFR1Q15390 333 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 PREPLQ4J6C6 727 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 SWT1Q5T5J6 900 aaKnown RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 FAXCQ5TGI0 409 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 MPZL3Q6UWV2 235 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ADCK1Q86TW2 530 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 IQCKQ8N0W5 287 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ZCCHC9Q8N567 271 aaKnown RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 SLC7A14Q8TBB6 771 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ZNF398Q8TD17 642 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ACSF2Q96CM8 615 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 BEGAINQ9BUH8 593 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 DNAJC18Q9H819 358 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 TMEM51Q9NW97 253 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 AAR2Q9Y312 384 aaKnown RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 SLC30A1Q9Y6M5 507 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 RRN3P2A6NIE6 340 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 FCHO1O14526 889 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 SLITRK3O94933 977 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ZCCHC18P0CG32 403 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ALADP13716 330 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 340 ms