RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 HECTD3Q5T447 861 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 ATL3Q6DD88 541 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 PAQR9Q6ZVX9 377 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 ETFBKMTQ8IXQ9 262 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 KCNV2Q8TDN2 545 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 FBXO32Q969P5 355 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 PAGE5Q96GU1 130 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 SPACA7Q96KW9 195 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 KCNK16Q96T55 309 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 COMMD8Q9NX08 183 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 CGNQ9P2M7 1197 aaKnown RBP16.24■□□□□ 0.19
CLCN6-207ENST00000376497 NXF1Q9UBU9 619 aaKnown RBP16.24■□□□□ 0.19
CLCN6-207ENST00000376497 CHORDC1Q9UHD1 332 aaPredicted RBP16.24■□□□□ 0.19
CLCN6-207ENST00000376497 MBD1Q9UIS9 605 aaPredicted RBP16.24■□□□□ 0.19
CLCN6-207ENST00000376497 CFAP45Q9UL16 551 aa16.24■□□□□ 0.19
CLCN6-207ENST00000376497 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 FAM92AA1XBS5 289 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 ZDHHC11BP0C7U3 371 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 DPP6P42658 865 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 TUBP50607 506 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 BMT2Q1RMZ1 405 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 PREPLQ4J6C6 727 aaPredicted RBP16.23■□□□□ 0.19
CLCN6-207ENST00000376497 TRIM61Q5EBN2 209 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 PEAR1Q5VY43 1037 aaPredicted RBP16.23■□□□□ 0.19
CLCN6-207ENST00000376497 UNQ6494/PRO21346Q6UXR6 183 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 SYT12Q8IV01 421 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 TMEFF1Q8IYR6 380 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 FRMD1Q8N878 549 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 SPATA32Q96LK8 384 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 NUSAP1Q9BXS6 441 aaKnown RBP16.23■□□□□ 0.19
CLCN6-207ENST00000376497 GOLPH3LQ9H4A5 285 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 MAGEF1Q9HAY2 307 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 TMEM74BQ9NUR3 256 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 HPSEQ9Y251 543 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 SH3BP1Q9Y3L3 701 aa16.23■□□□□ 0.19
CLCN6-207ENST00000376497 ATP8B3O60423 1300 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 C1QTNF9BB2RNN3 333 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 HOXC11O43248 304 aaPredicted RBP16.22■□□□□ 0.19
CLCN6-207ENST00000376497 MAP3K13O43283 966 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 SLFN14P0C7P3 912 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 C1QTNF9P0C862 333 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 PTGER3P43115 390 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 NDUFA8P51970 172 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 SLC5A3P53794 718 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 CDH8P55286 799 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 CLDN10P78369 228 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 KDSRQ06136 332 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 FOXC1Q12948 553 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 STK4Q13043 487 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 BTBD8Q5XKL5 378 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 SLC23A3Q6PIS1 610 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 TRMT11Q7Z4G4 463 aaKnown RBP16.22■□□□□ 0.19
CLCN6-207ENST00000376497 FAM35AQ86V20 835 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 KDF1Q8NAX2 398 aaPredicted RBP16.22■□□□□ 0.19
CLCN6-207ENST00000376497 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 SCAMP5Q8TAC9 235 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 PLEKHO2Q8TD55 490 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 ELMO3Q96BJ8 720 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 TNIP3Q96KP6 325 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 TMEM121BQ9BXQ6 578 aaPredicted RBP16.22■□□□□ 0.19
CLCN6-207ENST00000376497 ZDHHC4Q9NPG8 344 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 SPHK2Q9NRA0 654 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 BCCIPQ9P287 314 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLCN6-207ENST00000376497 GON4LQ3T8J9 2241 aa16.22■□□□□ 0.19
CLCN6-207ENST00000376497 PVALEFA0A1B0GWK0 134 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 TCRBV21S2A2A0A5A6 115 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 TBC1D3BA6NDS4 549 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 PHACTR2O75167 634 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 TULP3O75386 442 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 C4BPAP04003 597 aaKnown RBP16.21■□□□□ 0.19
CLCN6-207ENST00000376497 PDIA4P13667 645 aaKnown RBP16.21■□□□□ 0.19
CLCN6-207ENST00000376497 CMA1P23946 247 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 CASP4P49662 377 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 AP3M2P53677 418 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 KRT85P78386 507 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 KNOP1Q1ED39 458 aaKnown RBP16.21■□□□□ 0.19
CLCN6-207ENST00000376497 UAP1L1Q3KQV9 507 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 KMT5BQ4FZB7 885 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 ZNF667Q5HYK9 610 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 NUDT18Q6ZVK8 323 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 BBS7Q8IWZ6 715 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 CEP57L1Q8IYX8 460 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 PGBD3Q8N328 593 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 NAT16Q8N8M0 369 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 PARD3BQ8TEW8 1205 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 HMGB4Q8WW32 186 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 SMARCD1Q96GM5 515 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 MED10Q9BTT4 135 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 SMYD3Q9H7B4 428 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 CCSER2Q9H7U1 834 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 DMAP1Q9NPF5 467 aaPredicted RBP16.21■□□□□ 0.19
CLCN6-207ENST00000376497 DEC1Q9P2X7 70 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 PILRBQ9UKJ0 227 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 STARD13Q9Y3M8 1113 aa16.21■□□□□ 0.19
CLCN6-207ENST00000376497 EXOC3O60645 756 aa16.2■□□□□ 0.18
CLCN6-207ENST00000376497 HOXD12P35452 270 aa16.2■□□□□ 0.18
CLCN6-207ENST00000376497 ZNF699Q32M78 642 aa16.2■□□□□ 0.18
CLCN6-207ENST00000376497 LYSMD4Q5XG99 296 aa16.2■□□□□ 0.18
CLCN6-207ENST00000376497 ARMCX6Q7L4S7 300 aa16.2■□□□□ 0.18
CLCN6-207ENST00000376497 TMEM25Q86YD3 366 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms