RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 COLGALT1Q8NBJ5 622 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 PDLIM2Q96JY6 352 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 FGFR2P21802 821 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 HIST2H2ACQ16777 129 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-203ENST00000375604 HIST2H2AA3Q6FI13 130 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 ATP8B4Q8TF62 1192 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 ZFP42Q96MM3 310 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 MKNK1Q9BUB5 465 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 TRPM5Q9NZQ8 1165 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 TGFB2P61812 414 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 TMEM132BQ14DG7 1078 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 DEPDC1Q5TB30 811 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 SPOCD1Q6ZMY3 1216 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 SNCAIPQ9Y6H5 919 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 ALDH1A2O94788 518 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 GRIK5Q16478 980 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 UNC45BQ8IWX7 931 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 ENGASEQ8NFI3 743 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 ECSITQ9BQ95 431 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 GIMAP4Q9NUV9 329 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 PSD3Q9NYI0 1048 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 MAP10Q9P2G4 905 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 TSPAN16Q9UKR8 245 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 SYNCRIPO60506 623 aaKnown RBP17.71■□□□□ 0.43
MCF2L-203ENST00000375604 H2AFYO75367 372 aaKnown RBP17.71■□□□□ 0.43
MCF2L-203ENST00000375604 USP17L7P0C7H9 530 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 LSP1P33241 339 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 BCAT1P54687 386 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 MAPRE1Q15691 268 aaKnown RBP17.71■□□□□ 0.43
MCF2L-203ENST00000375604 FAM83EQ2M2I3 478 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 LINC00523Q86TU6 105 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 PDCD2LQ9BRP1 358 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 EXOSC4Q9NPD3 245 aaKnown RBP17.71■□□□□ 0.43
MCF2L-203ENST00000375604 IGF2BP3O00425 579 aaKnown RBP eCLIP17.71■□□□□ 0.43
MCF2L-203ENST00000375604 STRNO43815 780 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 SNRPFP62306 86 aaKnown RBP17.71■□□□□ 0.43
MCF2L-203ENST00000375604 XRRA1Q6P2D8 792 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 B3GALNT2Q8NCR0 500 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 XPNPEP3Q9NQH7 507 aa17.71■□□□□ 0.43
MCF2L-203ENST00000375604 LTFP02788 710 aa17.71■□□□□ 0.42
MCF2L-203ENST00000375604 TRPM8Q7Z2W7 1104 aa17.71■□□□□ 0.42
MCF2L-203ENST00000375604 VN1R5Q7Z5H4 357 aa17.71■□□□□ 0.42
MCF2L-203ENST00000375604 PLD3Q8IV08 490 aa17.71■□□□□ 0.42
MCF2L-203ENST00000375604 LRRC34Q8IZ02 419 aa17.71■□□□□ 0.42
MCF2L-203ENST00000375604 USP6NLQ92738 828 aa17.71■□□□□ 0.42
MCF2L-203ENST00000375604 TRDMT1O14717 391 aaKnown RBP17.7■□□□□ 0.42
MCF2L-203ENST00000375604 SOAT2O75908 522 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 RDM1Q8NG50 284 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 PHF21BQ96EK2 531 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 PCDHB12Q9Y5F1 795 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 F8VZ95 297 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 VIL1P09327 827 aaKnown RBP17.7■□□□□ 0.42
MCF2L-203ENST00000375604 IGFBP4P22692 258 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 PRR23CQ6ZRP0 262 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 WDR49Q8IV35 697 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 CNDP1Q96KN2 507 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 NSMCE4AQ9NXX6 385 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 WDR27A2RRH5 827 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 P4HA2O15460 535 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 PLA2G6O60733 806 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 CAMK2GQ13555 558 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-203ENST00000375604 SEC23AQ15436 765 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 TRIP10Q15642 601 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 CCDC142Q17RM4 750 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 GMCL1Q96IK5 515 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 PHTF1Q9UMS5 762 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 CEMIPQ8WUJ3 1361 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 O00370 1275 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 NR5A2O00482 541 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 CCDC159P0C7I6 412 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 FDFT1P37268 417 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 ALDH9A1P49189 494 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 SEMA3FQ13275 785 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 FBXO47Q5MNV8 452 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 ARRDC4Q8NCT1 418 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 METTL7BQ6UX53 244 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 KIAA0895Q8NCT3 520 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 HAO1Q9UJM8 370 aa17.7■□□□□ 0.42
MCF2L-203ENST00000375604 TRIM66O15016 1216 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 VPS26AO75436 327 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 PRIM2P49643 509 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 HDAC4P56524 1084 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 ACOX2Q99424 681 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 ZBTB22O15209 634 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 GPC1P35052 558 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 AADACL2Q6P093 401 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 REXO1L1PQ8IX06 675 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 ERGIC2Q96RQ1 377 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 E9PBE3 544 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 CCNT2O60583 730 aaKnown RBP17.69■□□□□ 0.42
MCF2L-203ENST00000375604 KLHL41O60662 606 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 LAMB3Q13751 1172 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 DENND1BQ6P3S1 775 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 HERC6Q8IVU3 1022 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 CAAP1Q9H8G2 361 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 CFAP73A6NFT4 308 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 ANKRD63C9JTQ0 380 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 CHUKO15111 745 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 IL1R1P14778 569 aa17.69■□□□□ 0.42
MCF2L-203ENST00000375604 BGNP21810 368 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms