RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 TRIM72Q6ZMU5 477 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ARHGAP24Q8N264 748 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 C17orf50Q8WW18 174 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 FAM81BQ96LP2 452 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 SPZ1Q9BXG8 430 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 MAN1C1Q9NR34 630 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 PAIP2BQ9ULR5 123 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 NOX1Q9Y5S8 564 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 PIK3CDO00329 1044 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 LSM1O15116 133 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ZMPSTE24O75844 475 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 NCKAP1LP55160 1127 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 NLRP11P59045 1033 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 MRPS5P82675 430 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ZNF543Q08ER8 600 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ASPHQ12797 758 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 BFSP1Q12934 665 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 SF3B3Q15393 1217 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 BMT2Q1RMZ1 405 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ASPRV1Q53RT3 343 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 PPP6R3Q5H9R7 873 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 TCHHL1Q5QJ38 904 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 CDC42EP5Q6NZY7 148 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 CBWD2Q8IUF1 395 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 CCDC89Q8N998 374 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ZNF564Q8TBZ8 553 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 TMEM143Q96AN5 459 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 SNX27Q96L92 541 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 PLVAPQ9BX97 442 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ZNF277Q9NRM2 450 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 APEX2Q9UBZ4 518 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 GTPBP10A4D1E9 387 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 FAM86B1E9PN63 330 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 CLPTM1O96005 669 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 FAM86B2P0C5J1 330 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 RAG1P15918 1043 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 SMARCA1P28370 1054 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 NDST2P52849 883 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 PPIDQ08752 370 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 TRPC3Q13507 836 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 TRMT5Q32P41 509 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 SBK1Q52WX2 424 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 DQX1Q8TE96 717 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 GIPC3Q8TF64 312 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 MTBPQ96DY7 904 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 DCUN1D1Q96GG9 259 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 PRPF18Q99633 342 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 TIMMDC1Q9NPL8 285 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 SELENONQ9NZV5 590 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 KDM3AQ9Y4C1 1321 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 EIF3FO00303 357 aaPredicted RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 PDXKO00764 312 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 ITM2AO43736 263 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 HSPA6P17066 643 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 GLRA2P23416 452 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 SERPINB8P50452 374 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 AP2B1P63010 937 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 ZNF200P98182 395 aaPredicted RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 CYLC2Q14093 348 aaPredicted RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 RABGAP1LQ5R372 815 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 C6orf183Q5T699 404 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 POTEHQ6S545 545 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 DENND5BQ6ZUT9 1274 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 KBTBD6Q86V97 674 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 CFAP36Q96G28 342 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 FAM111AQ96PZ2 611 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 MRPL1Q9BYD6 325 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 CYP4F11Q9HBI6 524 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 STRIP2Q9ULQ0 834 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 A8MU76 341 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 IPO5O00410 1097 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 HNRNPCL1O60812 293 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 MSX2P35548 267 aaPredicted RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 STAT2P52630 851 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 MLLT10P55197 1068 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 MAP7Q14244 749 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 ZNF423Q2M1K9 1284 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 SCARA3Q6AZY7 606 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 TXNRD3NBQ6F5E7 133 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 PRPF39Q86UA1 669 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 RHOT2Q8IXI1 618 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 ACAP3Q96P50 834 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 TMEM39BQ9GZU3 492 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 UNC45AQ9H3U1 944 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 DNMT3BQ9UBC3 853 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 NARFQ9UHQ1 456 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 DNPEPQ9ULA0 475 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 SMG5Q9UPR3 1016 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 DMTF1Q9Y222 760 aa9.09□□□□□ -0.95
SMARCA1-203ENST00000371123 FOCADQ5VW36 1801 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 CROCCQ5TZA2 2017 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 C7orf72A4D263 438 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 DGKIO75912 1065 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 ZBED1O96006 694 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 ALDH18A1P54886 795 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 DCDC5Q6ZRR9 648 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 KDELC2Q7Z4H8 507 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 ZBTB46Q86UZ6 589 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms