RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 VAT1Q99536 393 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 PRKD2Q9BZL6 878 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 AMACRQ9UHK6 382 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 TSPAN16Q9UKR8 245 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 TRHDEQ9UKU6 1024 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 USP18Q9UMW8 372 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 HOXB8P17481 243 aaPredicted RBP10.19□□□□□ -0.78
SCAF11-202ENST00000369367 PPP2R2AP63151 447 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 POU4F1Q01851 419 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 PCYOX1LQ8NBM8 494 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 EXD1Q8NHP7 514 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 ROPN1BQ9BZX4 212 aaPredicted RBP10.19□□□□□ -0.78
SCAF11-202ENST00000369367 ROPN1Q9HAT0 212 aaPredicted RBP10.19□□□□□ -0.78
SCAF11-202ENST00000369367 DERAQ9Y315 318 aa10.19□□□□□ -0.78
SCAF11-202ENST00000369367 C1QTNF3-AMACRE9PGA6 284 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SRP72O76094 671 aaKnown RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 CTCFP49711 727 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ZNF280AP59817 542 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SLC39A12Q504Y0 691 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ATP13A1Q9HD20 1204 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 AGPAT5Q9NUQ2 364 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SLC45A1Q9Y2W3 748 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 GYG2O15488 501 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 HAUS5O94927 633 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ALOX15P16050 662 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 MAP3K10Q02779 954 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 FNDC3BQ53EP0 1204 aaKnown RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 TTC39BQ5VTQ0 682 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 LBX2Q6XYB7 198 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 FAR2Q96K12 515 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 KIF17Q9P2E2 1029 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 TSR3Q9UJK0 312 aaKnown RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ARHGAP26Q9UNA1 814 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 MRC1P22897 1456 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 FMN2Q9NZ56 1722 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 A0A0A6YYK5 440 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 TBC1D3BA6NDS4 549 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 FAM47DPA6NHR8 397 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SDR42E2A6NKP2 422 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SEPT4O43236 478 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 PLCL1Q15111 1095 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SETD3Q86TU7 594 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 TAGAPQ8N103 731 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SGSM3Q96HU1 749 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 DNMT3LQ9UJW3 386 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ZDHHC9Q9Y397 364 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ZSCAN5CA6NGD5 496 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 GLUD1P00367 558 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 CDH2P19022 906 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 CCL23P55773 120 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SMTNL2Q2TAL5 461 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ANKS6Q68DC2 871 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 DENND5BQ6ZUT9 1274 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 VPS50Q96JG6 964 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 HSFY1Q96LI6 401 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 TRABDQ9H4I3 376 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 MRPS17Q9Y2R5 130 aaKnown RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 FGF10O15520 208 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ARIH2O95376 493 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 OR1E1P30953 314 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ERMARDQ5T6L9 678 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 FAM46CQ5VWP2 391 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 CD99L2Q8TCZ2 262 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 RXFP2Q8WXD0 754 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 HES6Q96HZ4 224 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 CCDC3Q9BQI4 270 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 NMRK2Q9NPI5 230 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SEPT3Q9UH03 358 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 PSMA3P25788 255 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 THOP1P52888 689 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 CLNS1AP54105 237 aaKnown RBP10.18□□□□□ -0.78
SCAF11-202ENST00000369367 SESN3P58005 492 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 ZFP69BQ9UJL9 534 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 CDY1Q9Y6F8 540 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 LTBP3Q9NS15 1303 aa10.18□□□□□ -0.78
SCAF11-202ENST00000369367 HNRNPRO43390 633 aaKnown RBP10.17□□□□□ -0.78
SCAF11-202ENST00000369367 LRRC49Q8IUZ0 686 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 DACT3Q96B18 629 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-202ENST00000369367 IL17RAQ96F46 866 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 APOL5Q9BWW9 433 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 PDGFDQ9GZP0 370 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-202ENST00000369367 POPDC2Q9HBU9 364 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 MARCH2Q9P0N8 246 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 PTCH2Q9Y6C5 1203 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 MSH3P20585 1137 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 CNTFP26441 200 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 HSPA9P38646 679 aaKnown RBP10.17□□□□□ -0.78
SCAF11-202ENST00000369367 HELQQ8TDG4 1101 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 ZSWIM1Q9BR11 485 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 OPLAHO14841 1288 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 SPAG7O75391 227 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 PROSCO94903 275 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 LTFP02788 710 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 MZF1P28698 734 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-202ENST00000369367 SERPINA4P29622 427 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 RFC1P35251 1148 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-202ENST00000369367 ADIGQ0VDE8 80 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 CCDC60Q8IWA6 550 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-202ENST00000369367 MAGEC3Q8TD91 643 aa10.17□□□□□ -0.78
SCAF11-202ENST00000369367 GANQ9H2C0 597 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms