RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 YY1P25490 414 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ARL4DP49703 201 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 HYIQ5T013 277 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RETSATQ6NUM9 610 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SPOCD1Q6ZMY3 1216 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ZNF571Q7Z3V5 609 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 KDELC2Q7Z4H8 507 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 METTL3Q86U44 580 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 OOSP2Q86WS3 158 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 EIF1ADQ8N9N8 165 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 L3MBTL3Q96JM7 780 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 C9orf72Q96LT7 481 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 OXCT2Q9BYC2 517 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ERBB2P04626 1255 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 HOXB8P17481 243 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CHRM3P20309 590 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 YWHAQP27348 245 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CHADLQ6NUI6 762 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 E2F7Q96AV8 911 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SEZ6LQ9BYH1 1024 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 ABCC13Q9NSE7 274 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PCMTD2Q9NV79 361 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PLA2G4CQ9UP65 541 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SHOC2Q9UQ13 582 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 RAD54BQ9Y620 910 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SUPT3HB4E1H0 165 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 ADCY6O43306 1168 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 RBP1P09455 135 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CKBP12277 381 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 LRRC14Q15048 493 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF284Q2VY69 593 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 ARMC6Q6NXE6 501 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF662Q6ZS27 426 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PPTC7Q8NI37 304 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 TEKT4Q8WW24 435 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 ILKAPQ9H0C8 392 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 C2CD2Q9Y426 696 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 FRMD3A2A2Y4 597 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 TTLL13PA6NNM8 815 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PHF20L1A8MW92 1017 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 ZBTB48P10074 688 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PTENP60484 403 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 POU4F1Q01851 419 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CNTN2Q02246 1040 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 NAB1Q13506 487 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 KYNUQ16719 465 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SEZ6Q53EL9 994 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 RGMBQ6NW40 437 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SLC22A9Q8IVM8 553 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 POP1Q99575 1024 aaKnown RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 FHDC1Q9C0D6 1143 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 LRRC4BQ9NT99 713 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CLCA2Q9UQC9 943 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PCDHA3Q9Y5H8 950 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SPACA6W5XKT8 324 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 TMEM120BA0PK00 339 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 LACTBL1A8MY62 500 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 C5orf58C9J3I9 102 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 FGF10O15520 208 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 MICAL2O94851 1124 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 GCKP35557 465 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CARSP49589 748 aaKnown RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 TBX4P57082 545 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 POLR2LP62875 67 aaKnown RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CDK16Q00536 496 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SP3Q02447 781 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 STX5Q13190 355 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CCDC149Q6ZUS6 474 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 GPR142Q7Z601 462 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CDR2LQ86X02 465 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 NAF1Q96HR8 494 aaKnown RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 FAM161BQ96MY7 647 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 XPO6Q96QU8 1125 aaKnown RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CCT8L2Q96SF2 557 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 GANQ9H2C0 597 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 MLXIPLQ9NP71 852 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 FAM32AQ9Y421 112 aaKnown RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PMPCBO75439 489 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PLEKP08567 350 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SERPINF2P08697 491 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CYP2F1P24903 491 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 MAPK1P28482 360 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PGM1P36871 562 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 HSD17B3P37058 310 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 PRKCIP41743 596 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 OTUD4Q01804 1114 aaKnown RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 CNGA2Q16280 664 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 LRRC8EQ6NSJ5 796 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SLC25A41Q8N5S1 370 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SNX31Q8N9S9 440 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 ANKRD7Q92527 254 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 HSFY1Q96LI6 401 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 MRPL46Q9H2W6 279 aaKnown RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 RUBCNLQ9H714 662 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 BLOC1S4Q9NUP1 217 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 UNCXA6NJT0 531 aa5.02□□□□□ -1.61
SCN3A-202ENST00000360093 ERI2A8K979 691 aaKnown RBP5.02□□□□□ -1.61
SCN3A-202ENST00000360093 SLC9A3R1O14745 358 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms