RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 CACTIN-AS1Q8N1I8 211 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 ESX1Q8N693 406 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 USP6NLQ92738 828 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 RUNDC3BQ96NL0 473 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 PLGRKTQ9HBL7 147 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 C1orf112Q9NSG2 853 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 PCDHB2Q9Y5E7 798 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 BRCA1P38398 1863 aaKnown RBP17.8■□□□□ 0.44
PRKCD-201ENST00000330452 ACOT2P49753 483 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 MED21Q13503 144 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 THOC5Q13769 683 aaKnown RBP17.8■□□□□ 0.44
PRKCD-201ENST00000330452 IL23RQ5VWK5 629 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 NEK10Q6ZWH5 1172 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 CCDC60Q8IWA6 550 aaPredicted RBP17.8■□□□□ 0.44
PRKCD-201ENST00000330452 METTL25Q8N6Q8 603 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 DMTF1Q9Y222 760 aa17.8■□□□□ 0.44
PRKCD-201ENST00000330452 NDC80O14777 642 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 GSC2O15499 205 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 APOEP02649 317 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 TFPTP0C1Z6 253 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 TNNI1P19237 187 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 RPS12P25398 132 aaKnown RBP17.79■□□□□ 0.44
PRKCD-201ENST00000330452 CCND2P30279 289 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 ZBTB17Q13105 803 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 MPP2Q14168 576 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 USP37Q86T82 979 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 MAGEB18Q96M61 343 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 POLR3FQ9H1D9 316 aaPredicted RBP17.79■□□□□ 0.44
PRKCD-201ENST00000330452 ARMC7Q9H6L4 198 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 RBMX2Q9Y388 322 aaKnown RBP17.79■□□□□ 0.44
PRKCD-201ENST00000330452 A0A088AWK7 358 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 ANPEPP15144 967 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 TAC1P20366 129 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 IVDP26440 423 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 RAB15P59190 212 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 TMEM132BQ14DG7 1078 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 ZNF568Q3ZCX4 644 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 TAF1BQ53T94 588 aaPredicted RBP17.79■□□□□ 0.44
PRKCD-201ENST00000330452 BRDTQ58F21 947 aaPredicted RBP17.79■□□□□ 0.44
PRKCD-201ENST00000330452 HSP90AA5PQ58FG0 334 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 TREML2Q5T2D2 321 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 PYROXD1Q8WU10 500 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 PDLIM7Q9NR12 457 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 HOXC10Q9NYD6 342 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 PTPRJQ12913 1337 aa17.79■□□□□ 0.44
PRKCD-201ENST00000330452 ANKRD34BA5PLL1 514 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 HLA-DRAP01903 254 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 PABPC1P11940 636 aaKnown RBP17.78■□□□□ 0.44
PRKCD-201ENST00000330452 STX2P32856 288 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 ITGA8P53708 1063 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 NLRP11P59045 1033 aaKnown RBP17.78■□□□□ 0.44
PRKCD-201ENST00000330452 PRKCEQ02156 737 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 CNGA3Q16281 694 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 GPR162Q16538 588 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 MTERF2Q49AM1 385 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 MFSD5Q6N075 450 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 C15orf39Q6ZRI6 1047 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 GRAMD2AQ8IUY3 354 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 PPP1R14CQ8TAE6 165 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 VTA1Q9NP79 307 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 KCNK9Q9NPC2 374 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 WHRNQ9P202 907 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 SNX9Q9Y5X1 595 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 LOC105371267A0A1B0GV96 52 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 NOTOA8MTQ0 251 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 DGAT1O75907 488 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 GARTP22102 1010 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 GJC1P36383 396 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 NSFP46459 744 aaKnown RBP17.78■□□□□ 0.44
PRKCD-201ENST00000330452 KYNUQ16719 465 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 TDRD10Q5VZ19 366 aaKnown RBP17.78■□□□□ 0.44
PRKCD-201ENST00000330452 RHBDF2Q6PJF5 856 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 SLCO2A1Q92959 643 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 ZBTB45Q96K62 511 aaPredicted RBP17.78■□□□□ 0.44
PRKCD-201ENST00000330452 C11orf70Q9BRQ4 267 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 DCLK3Q9C098 648 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 CYP26B1Q9NR63 512 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 RNF181Q9P0P0 153 aa17.78■□□□□ 0.44
PRKCD-201ENST00000330452 FUCA1P04066 466 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 PHBP35232 272 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 LIG4P49917 911 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 TUBA1BP68363 451 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 C16orf72Q14CZ0 275 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 SPDYAQ5MJ70 313 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 WDR45BQ5MNZ6 344 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 TUBA1AQ71U36 451 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 TRMT10CQ7L0Y3 403 aaKnown RBP17.77■□□□□ 0.44
PRKCD-201ENST00000330452 EEPD1Q7L9B9 569 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 PRUNE1Q86TP1 453 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 FAM20CQ8IXL6 584 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 UPF1Q92900 1129 aaKnown RBP eCLIP17.77■□□□□ 0.44
PRKCD-201ENST00000330452 GPRASP2Q96D09 838 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 KLRG1Q96E93 195 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 BTBD10Q9BSF8 475 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 C17orf75Q9HAS0 396 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 ZDHHC7Q9NXF8 308 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 ARHGAP28Q9P2N2 729 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 TBKBP1A7MCY6 615 aa17.77■□□□□ 0.44
PRKCD-201ENST00000330452 HNRNPCL1O60812 293 aaKnown RBP17.77■□□□□ 0.44
PRKCD-201ENST00000330452 RALAP11233 206 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms