RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 TDRD5Q8NAT2 981 aaKnown RBP19.95■□□□□ 0.78
USP48-201ENST00000308271 PIWIL2Q8TC59 973 aaKnown RBP19.95■□□□□ 0.78
USP48-201ENST00000308271 CERKQ8TCT0 537 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 KCNQ5Q9NR82 932 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 MAGEB2O15479 319 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 MYL4P12829 197 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 TFE3P19532 575 aaPredicted RBP19.95■□□□□ 0.78
USP48-201ENST00000308271 CWF19L1Q69YN2 538 aaKnown RBP19.95■□□□□ 0.78
USP48-201ENST00000308271 TPST1O60507 370 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 AAGABQ6PD74 315 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 SAMD3Q8N6K7 520 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 FAM81AQ8TBF8 368 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 ZDHHC15Q96MV8 337 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 SPATA33Q96N06 139 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 FAM210AQ96ND0 272 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 GCNAQ96QF7 691 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 WRNIP1Q96S55 665 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 TMEM79Q9BSE2 394 aa19.95■□□□□ 0.78
USP48-201ENST00000308271 DPPA5A6NC42 116 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 GSC2O15499 205 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 RPL5P46777 297 aaKnown RBP19.94■□□□□ 0.78
USP48-201ENST00000308271 GOLGA7BQ2TAP0 167 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 C6orf89Q6UWU4 347 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 WDR49Q8IV35 697 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 MAP4K3Q8IVH8 894 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 RMND5BQ96G75 393 aaPredicted RBP19.94■□□□□ 0.78
USP48-201ENST00000308271 HPDLQ96IR7 371 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 WNK4Q96J92 1243 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 SLITRK1Q96PX8 696 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 SIK2Q9H0K1 926 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 FAM49BQ9NUQ9 324 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 FAM208AQ9UK61 1670 aaKnown RBP19.94■□□□□ 0.78
USP48-201ENST00000308271 ME2P23368 584 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 DPYSL3Q14195 570 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 FAM83EQ2M2I3 478 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 CCDC153Q494R4 210 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 TTLL6Q8N841 843 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 ACER1Q8TDN7 264 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 FGFBP2Q9BYJ0 223 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 AGO4Q9HCK5 861 aaKnown RBP19.94■□□□□ 0.78
USP48-201ENST00000308271 CAPRIN1Q14444 709 aaKnown RBP19.94■□□□□ 0.78
USP48-201ENST00000308271 SEZ6Q53EL9 994 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 TNIP2Q8NFZ5 429 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 PPP1R2P1Q96PQ5 205 aa19.94■□□□□ 0.78
USP48-201ENST00000308271 NPTXRO95502 500 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 KCNA2P16389 499 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 GCLCP48506 637 aaPredicted RBP19.93■□□□□ 0.78
USP48-201ENST00000308271 MAMLD1Q13495 774 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 IMPG1Q17R60 797 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 ASAP3Q8TDY4 903 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 TRIM62Q9BVG3 475 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 PHACTR1Q9C0D0 580 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 CACYBPQ9HB71 228 aaKnown RBP19.93■□□□□ 0.78
USP48-201ENST00000308271 DDX28Q9NUL7 540 aaKnown RBP19.93■□□□□ 0.78
USP48-201ENST00000308271 ITGAVP06756 1048 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 HMOX2P30519 316 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 TTLL4Q14679 1199 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 ZNF483Q8TF39 744 aaPredicted RBP19.93■□□□□ 0.78
USP48-201ENST00000308271 CCDC126Q96EE4 140 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 KIF17Q9P2E2 1029 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 ATP11BQ9Y2G3 1177 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 KANSL1LA0AUZ9 987 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 DFFAO00273 331 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 DCXO43602 365 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 VIL1P09327 827 aaKnown RBP19.93■□□□□ 0.78
USP48-201ENST00000308271 MYL6P60660 151 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 BST1Q10588 318 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 MTMR2Q13614 643 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 POLLQ9UGP5 575 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 LGALS13Q9UHV8 139 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 TMX2Q9Y320 296 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 TBC1D12O60347 775 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 TRIM13O60858 407 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 KRT8P05787 483 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 SPATA31C1P0DKV0 1188 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 ETS1P14921 441 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 CDH2P19022 906 aaPredicted RBP19.93■□□□□ 0.78
USP48-201ENST00000308271 SERPINB1P30740 379 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 GP5P40197 560 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 NCKAP1LP55160 1127 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 PDK3Q15120 406 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 RXFP2Q8WXD0 754 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 ULK4Q96C45 1275 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 PRMT7Q9NVM4 692 aaPredicted RBP19.93■□□□□ 0.78
USP48-201ENST00000308271 SPATA31A1Q5TZJ5 1347 aa19.93■□□□□ 0.78
USP48-201ENST00000308271 F8VP50 259 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 CDK7P50613 346 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 JAM2P57087 298 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 DENND1BQ6P3S1 775 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 ZCCHC23Q6ZST2 131 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 STRA8Q7Z7C7 330 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 LINC00523Q86TU6 105 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 PLD3Q8IV08 490 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 FAM172AQ8WUF8 416 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 DLG3Q92796 817 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 IL1RL2Q9HB29 575 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 MYRFQ9Y2G1 1151 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 BCL9O00512 1426 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 TISP43B9A030 160 aa19.92■□□□□ 0.78
USP48-201ENST00000308271 MRPS15P82914 257 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms