RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CDKN2BP42772 138 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 TTMPQ5BVD1 217 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 MDH1BQ5I0G3 518 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 SPDYCQ5MJ68 293 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 FAM171A1Q5VUB5 890 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 FUT10Q6P4F1 479 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 THEM5Q8N1Q8 247 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 ATL2Q8NHH9 583 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 ART4Q93070 314 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 YME1L1Q96TA2 773 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 FAM129AQ9BZQ8 928 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 PSD3Q9NYI0 1048 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 HESX1Q9UBX0 185 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 NEU2Q9Y3R4 380 aa23.68■■□□□ 1.38
CDX1-201ENST00000231656 SF3B1O75533 1304 aaKnown RBP eCLIP23.67■■□□□ 1.38
CDX1-201ENST00000231656 C3orf70A6NLC5 250 aaPredicted RBP23.67■■□□□ 1.38
CDX1-201ENST00000231656 TULP2O00295 520 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 GJB5O95377 273 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 KRT14P02533 472 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 ADORA2BP29275 332 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 ACAP1Q15027 740 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 SPOUT1Q5T280 376 aaKnown RBP23.67■■□□□ 1.38
CDX1-201ENST00000231656 ZFYVE27Q5T4F4 411 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 PMF1Q6P1K2 205 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 FUKQ8N0W3 1084 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 SLC35F5Q8WV83 523 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 HERVK_113Q902F9 699 aa23.67■■□□□ 1.38
CDX1-201ENST00000231656 HNRNPABQ99729 332 aaKnown RBP23.67■■□□□ 1.38
CDX1-201ENST00000231656 LBHD1Q9BQE6 289 aaPredicted RBP23.67■■□□□ 1.38
CDX1-201ENST00000231656 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.67■■□□□ 1.38
CDX1-201ENST00000231656 FEZ2Q9UHY8 353 aaPredicted RBP23.67■■□□□ 1.38
CDX1-201ENST00000231656 MYBPHLA2RUH7 354 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 PIK3R2O00459 728 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 TJP3O95049 919 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 OAZ2O95190 189 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 KRT7P08729 469 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 RGS7P49802 495 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 ZNF143P52747 638 aaPredicted RBP23.66■■□□□ 1.38
CDX1-201ENST00000231656 ELAVL2Q12926 359 aaKnown RBP23.66■■□□□ 1.38
CDX1-201ENST00000231656 TFDP3Q5H9I0 405 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 OR6B2Q6IFH4 312 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 TRNP1Q6NT89 227 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 KCNT2Q6UVM3 1135 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 ANKRD52Q8NB46 1076 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 OR10T2Q8NGX3 314 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 PIWIL1Q96J94 861 aaKnown RBP23.66■■□□□ 1.38
CDX1-201ENST00000231656 WHRNQ9P202 907 aa23.66■■□□□ 1.38
CDX1-201ENST00000231656 MRPL42Q9Y6G3 142 aaKnown RBP23.66■■□□□ 1.38
CDX1-201ENST00000231656 LRRD1A4D1F6 860 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 GOLGA6CA6NDK9 693 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 C2CD4BA6NLJ0 364 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 GAS8O95995 478 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 GOLGA6DP0CG33 693 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 FGFR3P22607 806 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 DMTNQ08495 405 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 TAZQ16635 292 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 HADHQ16836 314 aaKnown RBP23.65■■□□□ 1.38
CDX1-201ENST00000231656 INTS6LQ5JSJ4 861 aaKnown RBP23.65■■□□□ 1.38
CDX1-201ENST00000231656 KAZNQ674X7 775 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 PAQR9Q6ZVX9 377 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 TMEM110Q86TL2 294 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 CEP57Q86XR8 500 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 MYCBPAPQ8TBZ2 947 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 STK32AQ8WU08 396 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 UBLCP1Q8WVY7 318 aaPredicted RBP23.65■■□□□ 1.38
CDX1-201ENST00000231656 FAM118BQ9BPY3 351 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 GOLGA6AQ9NYA3 693 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 CEP290O15078 2479 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 CLDN5O00501 218 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 TP73O15350 636 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 GABBR2O75899 941 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 GPD1P21695 349 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 IVDP26440 423 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 HTRA4P83105 476 aaPredicted RBP23.65■■□□□ 1.38
CDX1-201ENST00000231656 VARS2Q5ST30 1063 aaKnown RBP23.65■■□□□ 1.38
CDX1-201ENST00000231656 FAM171BQ6P995 826 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 OLFML1Q6UWY5 402 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 PCED1BQ96HM7 432 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 IGSF21Q96ID5 467 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 B3GALT6Q96L58 329 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 TMEM209Q96SK2 561 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 PKMYT1Q99640 499 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 CNPY3Q9BT09 278 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 B3GNT5Q9BYG0 378 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 ZWILCHQ9H900 591 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 MTRF1LQ9UGC7 380 aaKnown RBP23.65■■□□□ 1.38
CDX1-201ENST00000231656 ATP8A1Q9Y2Q0 1164 aa23.65■■□□□ 1.38
CDX1-201ENST00000231656 KIAA1671Q9BY89 1806 aa23.64■■□□□ 1.38
CDX1-201ENST00000231656 LIASO43766 372 aa23.64■■□□□ 1.37
CDX1-201ENST00000231656 EFEMP2O95967 443 aa23.64■■□□□ 1.37
CDX1-201ENST00000231656 MIPP30301 263 aa23.64■■□□□ 1.37
CDX1-201ENST00000231656 CDR1P51861 262 aa23.64■■□□□ 1.37
CDX1-201ENST00000231656 BCAT1P54687 386 aa23.64■■□□□ 1.37
CDX1-201ENST00000231656 PDE4CQ08493 712 aa23.64■■□□□ 1.37
CDX1-201ENST00000231656 BST2Q10589 180 aaKnown RBP23.64■■□□□ 1.37
CDX1-201ENST00000231656 ODF2Q5BJF6 829 aa23.64■■□□□ 1.37
CDX1-201ENST00000231656 DRICH1Q6PGQ1 229 aaPredicted RBP23.64■■□□□ 1.37
CDX1-201ENST00000231656 RXFP2Q8WXD0 754 aa23.64■■□□□ 1.37
CDX1-201ENST00000231656 CCDC114Q96M63 670 aa23.64■■□□□ 1.37
CDX1-201ENST00000231656 ZNF558Q96NG5 402 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms