RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 ARXQ96QS3 562 aa8.87□□□□□ -0.99
CASC19-243ENST00000641588 GTPBP4Q9BZE4 634 aaKnown RBP8.87□□□□□ -0.99
CASC19-243ENST00000641588 POGKQ9P215 609 aa8.87□□□□□ -0.99
CASC19-243ENST00000641588 RCAN3Q9UKA8 241 aa8.87□□□□□ -0.99
CASC19-243ENST00000641588 NAP1L2Q9ULW6 460 aaPredicted RBP8.87□□□□□ -0.99
CASC19-243ENST00000641588 PLEKHG3A1L390 1219 aa8.86□□□□□ -0.99
CASC19-243ENST00000641588 PTMSP20962 102 aa8.86□□□□□ -0.99
CASC19-243ENST00000641588 FOSBP53539 338 aa8.86□□□□□ -0.99
CASC19-243ENST00000641588 TTLL12Q14166 644 aaPredicted RBP8.86□□□□□ -0.99
CASC19-243ENST00000641588 EXOC6Q8TAG9 804 aa8.86□□□□□ -0.99
CASC19-243ENST00000641588 FBXW7Q969H0 707 aa8.86□□□□□ -0.99
CASC19-243ENST00000641588 TRIM44Q96DX7 344 aaPredicted RBP8.86□□□□□ -0.99
CASC19-243ENST00000641588 KDM5BQ9UGL1 1544 aa8.86□□□□□ -0.99
CASC19-243ENST00000641588 DMTNQ08495 405 aa8.85□□□□□ -0.99
CASC19-243ENST00000641588 TIAM1Q13009 1591 aa8.85□□□□□ -0.99
CASC19-243ENST00000641588 CCDC18Q5T9S5 1454 aa8.85□□□□□ -0.99
CASC19-243ENST00000641588 POTEB2H3BUK9 544 aa8.85□□□□□ -0.99
CASC19-243ENST00000641588 HOXB3P14651 431 aaPredicted RBP8.85□□□□□ -0.99
CASC19-243ENST00000641588 HS1BP3Q53T59 392 aa8.85□□□□□ -0.99
CASC19-243ENST00000641588 KHSRPQ92945 711 aaKnown RBP eCLIP8.85□□□□□ -0.997e-7■□□□□ 9.8
CASC19-243ENST00000641588 LRPPRCP42704 1394 aaKnown RBP8.84□□□□□ -0.99
CASC19-243ENST00000641588 NUDT7P0C024 238 aa8.84□□□□□ -0.99
CASC19-243ENST00000641588 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
CASC19-243ENST00000641588 ARSIQ5FYB1 569 aa8.84□□□□□ -0.99
CASC19-243ENST00000641588 OTUD5Q96G74 571 aa8.84□□□□□ -0.99
CASC19-243ENST00000641588 REPIN1Q9BWE0 567 aaKnown RBP8.84□□□□□ -0.99
CASC19-243ENST00000641588 SCAPERQ9BY12 1400 aa8.83□□□□□ -1
CASC19-243ENST00000641588 LRRC9Q6ZRR7 1453 aa8.83□□□□□ -1
CASC19-243ENST00000641588 DYNC1I1O14576 645 aa8.83□□□□□ -1
CASC19-243ENST00000641588 LETM1O95202 739 aaPredicted RBP8.83□□□□□ -1
CASC19-243ENST00000641588 DOK7Q18PE1 504 aa8.83□□□□□ -1
CASC19-243ENST00000641588 GIGYF2Q6Y7W6 1299 aaKnown RBP8.83□□□□□ -1
CASC19-243ENST00000641588 KIAA1211Q6ZU35 1233 aa8.83□□□□□ -1
CASC19-243ENST00000641588 ZNF454Q8N9F8 522 aa8.83□□□□□ -1
CASC19-243ENST00000641588 STAC3Q96MF2 364 aa8.83□□□□□ -1
CASC19-243ENST00000641588 ZMYM4Q5VZL5 1548 aa8.83□□□□□ -1
CASC19-243ENST00000641588 ZMYM3Q14202 1370 aa8.82□□□□□ -1
CASC19-243ENST00000641588 C8orf34Q49A92 452 aa8.82□□□□□ -1
CASC19-243ENST00000641588 C6orf132Q5T0Z8 1188 aa8.82□□□□□ -1
CASC19-243ENST00000641588 PNISRQ8TF01 805 aaKnown RBP8.82□□□□□ -1
CASC19-243ENST00000641588 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
CASC19-243ENST00000641588 HFM1A2PYH4 1435 aa8.82□□□□□ -1
CASC19-243ENST00000641588 MYOM3Q5VTT5 1437 aa8.82□□□□□ -1
CASC19-243ENST00000641588 KDM2BQ8NHM5 1336 aa8.82□□□□□ -1
CASC19-243ENST00000641588 ROCK2O75116 1388 aaKnown RBP8.81□□□□□ -1
CASC19-243ENST00000641588 DDX11L8A8MPP1 907 aa8.81□□□□□ -1
CASC19-243ENST00000641588 POLR1AO95602 1720 aaPredicted RBP8.81□□□□□ -1
CASC19-243ENST00000641588 SLC4A3P48751 1232 aa8.81□□□□□ -1
CASC19-243ENST00000641588 CSPP1Q1MSJ5 1256 aa8.81□□□□□ -1
CASC19-243ENST00000641588 ZSCAN30Q86W11 494 aa8.81□□□□□ -1
CASC19-243ENST00000641588 PHOX2BQ99453 314 aa8.81□□□□□ -1
CASC19-243ENST00000641588 GRPEL1Q9HAV7 217 aa8.81□□□□□ -1
CASC19-243ENST00000641588 BRD4O60885 1362 aaPredicted RBP8.81□□□□□ -1
CASC19-243ENST00000641588 MIA2Q96PC5 1412 aa8.8□□□□□ -1
CASC19-243ENST00000641588 MCM4P33991 863 aa8.8□□□□□ -1
CASC19-243ENST00000641588 CCDC173Q0VFZ6 552 aa8.8□□□□□ -1
CASC19-243ENST00000641588 GPR153Q6NV75 609 aa8.8□□□□□ -1
CASC19-243ENST00000641588 ANP32BQ92688 251 aaKnown RBP8.8□□□□□ -1
CASC19-243ENST00000641588 SKOR2Q2VWA4 1001 aaPredicted RBP8.8□□□□□ -1
CASC19-243ENST00000641588 PPP1R9BQ96SB3 815 aa8.8□□□□□ -1
CASC19-243ENST00000641588 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
CASC19-243ENST00000641588 ADAM33Q9BZ11 813 aa8.8□□□□□ -1
CASC19-243ENST00000641588 ANTXR1Q9H6X2 564 aa8.8□□□□□ -1
CASC19-243ENST00000641588 ARHGAP35Q9NRY4 1499 aa8.79□□□□□ -1
CASC19-243ENST00000641588 RIMBP2O15034 1052 aa8.79□□□□□ -1
CASC19-243ENST00000641588 MCM5P33992 734 aa8.79□□□□□ -1
CASC19-243ENST00000641588 RIPK4P57078 832 aa8.79□□□□□ -1
CASC19-243ENST00000641588 MDM2Q00987 491 aaPredicted RBP8.79□□□□□ -1
CASC19-243ENST00000641588 CERKQ8TCT0 537 aa8.79□□□□□ -1
CASC19-243ENST00000641588 CCDC94Q9BW85 323 aaPredicted RBP8.79□□□□□ -1
CASC19-243ENST00000641588 ZSWIM6Q9HCJ5 1215 aa8.79□□□□□ -1
CASC19-243ENST00000641588 DHX29Q7Z478 1369 aaKnown RBP8.78□□□□□ -1
CASC19-243ENST00000641588 PLEKHH2Q8IVE3 1493 aa8.78□□□□□ -1
CASC19-243ENST00000641588 PADI6Q6TGC4 694 aa8.78□□□□□ -1
CASC19-243ENST00000641588 SMARCA4P51532 1647 aa8.78□□□□□ -1
CASC19-243ENST00000641588 FMN1Q68DA7 1419 aa8.77□□□□□ -1
CASC19-243ENST00000641588 PPP4R3BQ5MIZ7 849 aa8.77□□□□□ -1.01
CASC19-243ENST00000641588 GPCPD1Q9NPB8 672 aa8.77□□□□□ -1.01
CASC19-243ENST00000641588 SCUBE2Q9NQ36 999 aa8.77□□□□□ -1.01
CASC19-243ENST00000641588 CHMP5Q9NZZ3 219 aa8.77□□□□□ -1.01
CASC19-243ENST00000641588 SPATA31E1Q6ZUB1 1445 aa8.77□□□□□ -1.01
CASC19-243ENST00000641588 TRAK2O60296 914 aa8.76□□□□□ -1.01
CASC19-243ENST00000641588 ZNF500O60304 480 aaPredicted RBP8.76□□□□□ -1.01
CASC19-243ENST00000641588 FAM50AQ14320 339 aaKnown RBP8.76□□□□□ -1.01
CASC19-243ENST00000641588 RALBP1Q15311 655 aa8.76□□□□□ -1.01
CASC19-243ENST00000641588 METTL3Q86U44 580 aaKnown RBP8.76□□□□□ -1.01
CASC19-243ENST00000641588 FTSJ3Q8IY81 847 aaKnown RBP8.76□□□□□ -1.01
CASC19-243ENST00000641588 ZNF710Q8N1W2 664 aa8.76□□□□□ -1.01
CASC19-243ENST00000641588 TTC13Q8NBP0 860 aa8.76□□□□□ -1.01
CASC19-243ENST00000641588 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
CASC19-243ENST00000641588 ADGRG1Q9Y653 693 aa8.76□□□□□ -1.01
CASC19-243ENST00000641588 OATP04181 439 aa8.75□□□□□ -1.01
CASC19-243ENST00000641588 MSNP26038 577 aaKnown RBP8.75□□□□□ -1.01
CASC19-243ENST00000641588 SLC20A2Q08357 652 aa8.75□□□□□ -1.01
CASC19-243ENST00000641588 MAMSTRQ6ZN01 415 aa8.75□□□□□ -1.01
CASC19-243ENST00000641588 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.75□□□□□ -1.01
CASC19-243ENST00000641588 NLRP7Q8WX94 980 aa8.75□□□□□ -1.01
CASC19-243ENST00000641588 PANK2Q9BZ23 570 aa8.75□□□□□ -1.01
CASC19-243ENST00000641588 UPF2Q9HAU5 1272 aaKnown RBP8.75□□□□□ -1.01
CASC19-243ENST00000641588 LHX6Q9UPM6 363 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms