RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 SMARCE1Q969G3 411 aa17.33■□□□□ 0.36
CDH23-214ENST00000622827 SPC24Q8NBT2 197 aa17.33■□□□□ 0.36
CDH23-214ENST00000622827 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
CDH23-214ENST00000622827 EIF3JO75822 258 aaKnown RBP17.32■□□□□ 0.36
CDH23-214ENST00000622827 GTF2E1P29083 439 aaPredicted RBP17.32■□□□□ 0.36
CDH23-214ENST00000622827 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
CDH23-214ENST00000622827 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
CDH23-214ENST00000622827 ENOX2Q16206 610 aaKnown RBP17.31■□□□□ 0.36
CDH23-214ENST00000622827 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
CDH23-214ENST00000622827 MLECQ14165 292 aa17.31■□□□□ 0.36
CDH23-214ENST00000622827 PANK3Q9H999 370 aa17.31■□□□□ 0.36
CDH23-214ENST00000622827 RAD21O60216 631 aa17.31■□□□□ 0.36
CDH23-214ENST00000622827 ZFYVE27Q5T4F4 411 aa17.3■□□□□ 0.36
CDH23-214ENST00000622827 L3MBTL2Q969R5 705 aa17.3■□□□□ 0.36
CDH23-214ENST00000622827 CCDC112Q8NEF3 446 aa17.3■□□□□ 0.36
CDH23-214ENST00000622827 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
CDH23-214ENST00000622827 DHX16O60231 1041 aaKnown RBP17.3■□□□□ 0.36
CDH23-214ENST00000622827 NEXNQ0ZGT2 675 aa17.3■□□□□ 0.36
CDH23-214ENST00000622827 CENPHQ9H3R5 247 aa17.3■□□□□ 0.36
CDH23-214ENST00000622827 BRMS1Q9HCU9 246 aa17.29■□□□□ 0.36
CDH23-214ENST00000622827 ERICH2A1L162 156 aa17.29■□□□□ 0.36
CDH23-214ENST00000622827 KANK4Q5T7N3 995 aaPredicted RBP17.29■□□□□ 0.36
CDH23-214ENST00000622827 CDC45O75419 566 aa17.28■□□□□ 0.36
CDH23-214ENST00000622827 ERC2O15083 957 aa17.28■□□□□ 0.36
CDH23-214ENST00000622827 CCDC144AA2RUR9 1427 aa17.28■□□□□ 0.36
CDH23-214ENST00000622827 DHX8Q14562 1220 aaKnown RBP17.28■□□□□ 0.36
CDH23-214ENST00000622827 ERLIN1O75477 346 aa17.28■□□□□ 0.36
CDH23-214ENST00000622827 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
CDH23-214ENST00000622827 UACAQ9BZF9 1416 aa17.27■□□□□ 0.36
CDH23-214ENST00000622827 GON4LQ3T8J9 2241 aa17.27■□□□□ 0.36
CDH23-214ENST00000622827 PDCP20941 246 aa17.27■□□□□ 0.35
CDH23-214ENST00000622827 SEPT7Q16181 437 aaKnown RBP17.27■□□□□ 0.35
CDH23-214ENST00000622827 MAGEC2Q9UBF1 373 aaPredicted RBP17.26■□□□□ 0.35
CDH23-214ENST00000622827 AAMPQ13685 434 aa17.26■□□□□ 0.35
CDH23-214ENST00000622827 IQCEQ6IPM2 695 aa17.26■□□□□ 0.35
CDH23-214ENST00000622827 VPS37DQ86XT2 251 aa17.26■□□□□ 0.35
CDH23-214ENST00000622827 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
CDH23-214ENST00000622827 LNPKQ9C0E8 428 aa17.26■□□□□ 0.35
CDH23-214ENST00000622827 CTDP1Q9Y5B0 961 aaPredicted RBP17.25■□□□□ 0.35
CDH23-214ENST00000622827 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
CDH23-214ENST00000622827 RALYLQ86SE5 291 aaKnown RBP17.25■□□□□ 0.35
CDH23-214ENST00000622827 G3BP1Q13283 466 aaKnown RBP eCLIP17.25■□□□□ 0.35
CDH23-214ENST00000622827 CCDC192P0DO97 292 aa17.25■□□□□ 0.35
CDH23-214ENST00000622827 FAM193AP78312 1265 aa17.25■□□□□ 0.35
CDH23-214ENST00000622827 FILIP1LQ4L180 1135 aa17.24■□□□□ 0.35
CDH23-214ENST00000622827 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
CDH23-214ENST00000622827 WIZO95785 1651 aa17.24■□□□□ 0.35
CDH23-214ENST00000622827 GIMAP7Q8NHV1 300 aa17.24■□□□□ 0.35
CDH23-214ENST00000622827 NEFHP12036 1026 aa17.24■□□□□ 0.35
CDH23-214ENST00000622827 PSMA5P28066 241 aa17.24■□□□□ 0.35
CDH23-214ENST00000622827 ZNHIT6Q9NWK9 470 aaKnown RBP17.24■□□□□ 0.35
CDH23-214ENST00000622827 GGT6Q6P531 493 aa17.23■□□□□ 0.35
CDH23-214ENST00000622827 LRRCC1Q9C099 1032 aa17.23■□□□□ 0.35
CDH23-214ENST00000622827 EZRP15311 586 aaKnown RBP17.23■□□□□ 0.35
CDH23-214ENST00000622827 NGDNQ8NEJ9 315 aaKnown RBP17.23■□□□□ 0.35
CDH23-214ENST00000622827 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
CDH23-214ENST00000622827 GRPEL1Q9HAV7 217 aa17.23■□□□□ 0.35
CDH23-214ENST00000622827 FIBPO43427 364 aa17.22■□□□□ 0.35
CDH23-214ENST00000622827 CLASRPQ8N2M8 674 aaKnown RBP17.22■□□□□ 0.35
CDH23-214ENST00000622827 PRPF40AO75400 957 aaKnown RBP17.22■□□□□ 0.35
CDH23-214ENST00000622827 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
CDH23-214ENST00000622827 API5Q9BZZ5 524 aaKnown RBP17.22■□□□□ 0.35
CDH23-214ENST00000622827 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
CDH23-214ENST00000622827 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
CDH23-214ENST00000622827 RABEP1Q15276 862 aa17.21■□□□□ 0.35
CDH23-214ENST00000622827 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
CDH23-214ENST00000622827 PPFIBP1Q86W92 1011 aa17.21■□□□□ 0.34
CDH23-214ENST00000622827 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.34
CDH23-214ENST00000622827 LUC7LQ9NQ29 371 aaKnown RBP17.2■□□□□ 0.34
CDH23-214ENST00000622827 XBP1P17861 261 aa17.2■□□□□ 0.34
CDH23-214ENST00000622827 TXLNBQ8N3L3 684 aa17.2■□□□□ 0.34
CDH23-214ENST00000622827 PANK1Q8TE04 598 aa17.2■□□□□ 0.34
CDH23-214ENST00000622827 TNMDQ9H2S6 317 aa17.2■□□□□ 0.34
CDH23-214ENST00000622827 KRI1Q8N9T8 703 aaKnown RBP17.2■□□□□ 0.34
CDH23-214ENST00000622827 NGEFQ8N5V2 710 aa17.19■□□□□ 0.34
CDH23-214ENST00000622827 TXLNAP40222 546 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 PIP4K2AP48426 406 aaPredicted RBP17.18■□□□□ 0.34
CDH23-214ENST00000622827 COG3Q96JB2 828 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 ESPNB1AK53 854 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 GBP2P32456 591 aaPredicted RBP17.18■□□□□ 0.34
CDH23-214ENST00000622827 PDCL2Q8N4E4 241 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 MCM2P49736 904 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 CCDC181Q5TID7 509 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 APAF1O14727 1248 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 SERPINC1P01008 464 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 TAX1BP1Q86VP1 789 aa17.18■□□□□ 0.34
CDH23-214ENST00000622827 CARMIL2Q6F5E8 1435 aa17.17■□□□□ 0.34
CDH23-214ENST00000622827 RBM33Q96EV2 1170 aaKnown RBP17.17■□□□□ 0.34
CDH23-214ENST00000622827 CCDC102AQ96A19 550 aa17.17■□□□□ 0.34
CDH23-214ENST00000622827 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
CDH23-214ENST00000622827 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
CDH23-214ENST00000622827 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
CDH23-214ENST00000622827 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
CDH23-214ENST00000622827 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
CDH23-214ENST00000622827 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
CDH23-214ENST00000622827 ANKRD62A6NC57 917 aa17.16■□□□□ 0.34
CDH23-214ENST00000622827 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
CDH23-214ENST00000622827 PRDM10Q9NQV6 1147 aa17.16■□□□□ 0.34
CDH23-214ENST00000622827 CFAP65Q6ZU64 1925 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms