RNA–Protein interactions for RNA: ENST00000598346.5

FARP1-223, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-223ENST00000598346 PCDHB15Q9Y5E8 787 aa11.6□□□□□ -0.55
FARP1-223ENST00000598346 V9GY48 417 aaPredicted RBP11.6□□□□□ -0.55
FARP1-223ENST00000598346 RFC5P40937 340 aa11.59□□□□□ -0.55
FARP1-223ENST00000598346 COPS2P61201 443 aa11.59□□□□□ -0.55
FARP1-223ENST00000598346 QPCTQ16769 361 aa11.59□□□□□ -0.55
FARP1-223ENST00000598346 HLA-CQ95604 372 aa11.59□□□□□ -0.55
FARP1-223ENST00000598346 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
FARP1-223ENST00000598346 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
FARP1-223ENST00000598346 FDX1P10109 184 aa11.58□□□□□ -0.56
FARP1-223ENST00000598346 Q6ZNB5 142 aa11.58□□□□□ -0.56
FARP1-223ENST00000598346 LILRB3O75022 631 aa11.57□□□□□ -0.56
FARP1-223ENST00000598346 ZPR1O75312 459 aa11.57□□□□□ -0.56
FARP1-223ENST00000598346 GUCA2AQ02747 115 aa11.57□□□□□ -0.56
FARP1-223ENST00000598346 KMT5BQ4FZB7 885 aa11.57□□□□□ -0.56
FARP1-223ENST00000598346 PCDHGC3Q9UN70 934 aa11.57□□□□□ -0.56
FARP1-223ENST00000598346 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
FARP1-223ENST00000598346 PRPF38BQ5VTL8 546 aaKnown RBP11.56□□□□□ -0.56
FARP1-223ENST00000598346 ATP6V1AP38606 617 aa11.55□□□□□ -0.56
FARP1-223ENST00000598346 MCM6Q14566 821 aa11.55□□□□□ -0.56
FARP1-223ENST00000598346 CABLES1Q8TDN4 633 aa11.55□□□□□ -0.56
FARP1-223ENST00000598346 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
FARP1-223ENST00000598346 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
FARP1-223ENST00000598346 HRCP23327 699 aa11.54□□□□□ -0.56
FARP1-223ENST00000598346 NUTM2DQ5VT03 806 aaPredicted RBP11.54□□□□□ -0.56
FARP1-223ENST00000598346 NUTM2AQ8IVF1 878 aaPredicted RBP11.54□□□□□ -0.56
FARP1-223ENST00000598346 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
FARP1-223ENST00000598346 ZBTB3Q9H5J0 574 aa11.54□□□□□ -0.56
FARP1-223ENST00000598346 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
FARP1-223ENST00000598346 GFRA3O60609 400 aa11.53□□□□□ -0.56
FARP1-223ENST00000598346 TMEM259Q4ZIN3 620 aa11.53□□□□□ -0.56
FARP1-223ENST00000598346 RTL5Q5HYW3 569 aaPredicted RBP11.53□□□□□ -0.56
FARP1-223ENST00000598346 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
FARP1-223ENST00000598346 BANK1Q8NDB2 785 aa11.52□□□□□ -0.57
FARP1-223ENST00000598346 PUS10Q3MIT2 529 aaKnown RBP11.5□□□□□ -0.57
FARP1-223ENST00000598346 BLOC1S3Q6QNY0 202 aa11.5□□□□□ -0.57
FARP1-223ENST00000598346 SPDYE5A6NIY4 337 aa11.49□□□□□ -0.57
FARP1-223ENST00000598346 MTMR2Q13614 643 aa11.49□□□□□ -0.57
FARP1-223ENST00000598346 MORN1Q5T089 497 aa11.49□□□□□ -0.57
FARP1-223ENST00000598346 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
FARP1-223ENST00000598346 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
FARP1-223ENST00000598346 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
FARP1-223ENST00000598346 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
FARP1-223ENST00000598346 SLC27A5Q9Y2P5 690 aa11.47□□□□□ -0.57
FARP1-223ENST00000598346 NR1I2O75469 434 aa11.46□□□□□ -0.57
FARP1-223ENST00000598346 AP1G2O75843 785 aa11.46□□□□□ -0.57
FARP1-223ENST00000598346 SYMPKQ92797 1274 aaKnown RBP11.46□□□□□ -0.57
FARP1-223ENST00000598346 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
FARP1-223ENST00000598346 CLUAP1Q96AJ1 413 aa11.44□□□□□ -0.58
FARP1-223ENST00000598346 TRAF7Q6Q0C0 670 aa11.43□□□□□ -0.58
FARP1-223ENST00000598346 MTMR14Q8NCE2 650 aa11.43□□□□□ -0.58
FARP1-223ENST00000598346 CFAP99D6REC4 459 aa11.42□□□□□ -0.58
FARP1-223ENST00000598346 USP17L8P0C7I0 530 aa11.42□□□□□ -0.58
FARP1-223ENST00000598346 Q3C1V9 767 aa11.42□□□□□ -0.58
FARP1-223ENST00000598346 A6NJR5 290 aa11.41□□□□□ -0.58
FARP1-223ENST00000598346 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
FARP1-223ENST00000598346 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
FARP1-223ENST00000598346 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
FARP1-223ENST00000598346 SOCS7O14512 581 aa11.4□□□□□ -0.58
FARP1-223ENST00000598346 SLC19A1P41440 591 aa11.4□□□□□ -0.58
FARP1-223ENST00000598346 CTDSPL2Q05D32 466 aa11.4□□□□□ -0.58
FARP1-223ENST00000598346 RETREG3Q86VR2 466 aa11.4□□□□□ -0.58
FARP1-223ENST00000598346 SCUBE3Q8IX30 993 aa11.4□□□□□ -0.58
FARP1-223ENST00000598346 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
FARP1-223ENST00000598346 TSC1Q92574 1164 aa11.4□□□□□ -0.58
FARP1-223ENST00000598346 POM121Q96HA1 1249 aa11.4□□□□□ -0.58
FARP1-223ENST00000598346 ADH1BP00325 375 aa11.39□□□□□ -0.59
FARP1-223ENST00000598346 RNF19BQ6ZMZ0 732 aa11.39□□□□□ -0.59
FARP1-223ENST00000598346 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
FARP1-223ENST00000598346 RAD21O60216 631 aa11.38□□□□□ -0.59
FARP1-223ENST00000598346 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
FARP1-223ENST00000598346 TLL1O43897 1013 aa11.37□□□□□ -0.59
FARP1-223ENST00000598346 BRICD5Q6PL45 260 aa11.37□□□□□ -0.59
FARP1-223ENST00000598346 COG6Q9Y2V7 657 aa11.37□□□□□ -0.59
FARP1-223ENST00000598346 THAP11Q96EK4 314 aa11.36□□□□□ -0.59
FARP1-223ENST00000598346 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
FARP1-223ENST00000598346 APBB1O00213 710 aa11.35□□□□□ -0.59
FARP1-223ENST00000598346 S1PR4O95977 384 aa11.35□□□□□ -0.59
FARP1-223ENST00000598346 SLC6A16Q9GZN6 736 aa11.35□□□□□ -0.59
FARP1-223ENST00000598346 TRAK2O60296 914 aa11.34□□□□□ -0.59
FARP1-223ENST00000598346 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
FARP1-223ENST00000598346 PROSER2Q86WR7 435 aaPredicted RBP11.34□□□□□ -0.59
FARP1-223ENST00000598346 HMX1Q9NP08 348 aaPredicted RBP11.34□□□□□ -0.59
FARP1-223ENST00000598346 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
FARP1-223ENST00000598346 DESI1Q6ICB0 168 aa11.33□□□□□ -0.6
FARP1-223ENST00000598346 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
FARP1-223ENST00000598346 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
FARP1-223ENST00000598346 GJD4Q96KN9 370 aaPredicted RBP11.33□□□□□ -0.6
FARP1-223ENST00000598346 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
FARP1-223ENST00000598346 FNBP4Q8N3X1 1017 aaPredicted RBP11.32□□□□□ -0.6
FARP1-223ENST00000598346 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
FARP1-223ENST00000598346 SPSB2Q99619 263 aa11.31□□□□□ -0.6
FARP1-223ENST00000598346 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
FARP1-223ENST00000598346 PRM3Q9NNZ6 103 aa11.3□□□□□ -0.6
FARP1-223ENST00000598346 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
FARP1-223ENST00000598346 LCE2BO14633 110 aa11.29□□□□□ -0.6
FARP1-223ENST00000598346 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
FARP1-223ENST00000598346 PRR20EP86478 221 aa11.28□□□□□ -0.6
FARP1-223ENST00000598346 PRR20CP86479 221 aa11.28□□□□□ -0.6
FARP1-223ENST00000598346 PRR20DP86480 221 aa11.28□□□□□ -0.6
FARP1-223ENST00000598346 PRR20BP86481 221 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms