RNA–Protein interactions for RNA: ENST00000582509.1

TRAPPC8-209, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-209ENST00000582509 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
TRAPPC8-209ENST00000582509 PRPF38BQ5VTL8 546 aaKnown RBP11.31□□□□□ -0.6
TRAPPC8-209ENST00000582509 HLA-CQ95604 372 aa11.3□□□□□ -0.6
TRAPPC8-209ENST00000582509 USB1Q9BQ65 265 aaKnown RBP11.3□□□□□ -0.6
TRAPPC8-209ENST00000582509 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
TRAPPC8-209ENST00000582509 TLL1O43897 1013 aa11.29□□□□□ -0.6
TRAPPC8-209ENST00000582509 GUCA2AQ02747 115 aa11.29□□□□□ -0.6
TRAPPC8-209ENST00000582509 MTMR2Q13614 643 aa11.29□□□□□ -0.6
TRAPPC8-209ENST00000582509 MSS51Q4VC12 460 aa11.29□□□□□ -0.6
TRAPPC8-209ENST00000582509 RETREG3Q86VR2 466 aa11.29□□□□□ -0.6
TRAPPC8-209ENST00000582509 SLC6A16Q9GZN6 736 aa11.29□□□□□ -0.6
TRAPPC8-209ENST00000582509 A0A0G2JS52 829 aa11.28□□□□□ -0.6
TRAPPC8-209ENST00000582509 RNF19BQ6ZMZ0 732 aa11.28□□□□□ -0.6
TRAPPC8-209ENST00000582509 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
TRAPPC8-209ENST00000582509 ZBTB3Q9H5J0 574 aa11.28□□□□□ -0.6
TRAPPC8-209ENST00000582509 ATP1B4Q9UN42 357 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC8-209ENST00000582509 PCDHGC3Q9UN70 934 aa11.27□□□□□ -0.61
TRAPPC8-209ENST00000582509 PCMTD1Q96MG8 357 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC8-209ENST00000582509 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
TRAPPC8-209ENST00000582509 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.25□□□□□ -0.61
TRAPPC8-209ENST00000582509 LIMD1Q9UGP4 676 aa11.25□□□□□ -0.61
TRAPPC8-209ENST00000582509 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
TRAPPC8-209ENST00000582509 NUTM2BA6NNL0 878 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-209ENST00000582509 NUTM2EB1AL46 878 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-209ENST00000582509 NUTM2DQ5VT03 806 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-209ENST00000582509 NUTM2AQ8IVF1 878 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-209ENST00000582509 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-209ENST00000582509 PCDHB15Q9Y5E8 787 aa11.23□□□□□ -0.61
TRAPPC8-209ENST00000582509 LILRB3O75022 631 aa11.22□□□□□ -0.61
TRAPPC8-209ENST00000582509 S1PR4O95977 384 aa11.22□□□□□ -0.61
TRAPPC8-209ENST00000582509 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
TRAPPC8-209ENST00000582509 RGS20O76081 388 aa11.21□□□□□ -0.61
TRAPPC8-209ENST00000582509 HRCP23327 699 aa11.21□□□□□ -0.61
TRAPPC8-209ENST00000582509 DESI1Q6ICB0 168 aa11.21□□□□□ -0.61
TRAPPC8-209ENST00000582509 MMP16P51512 607 aa11.2□□□□□ -0.62
TRAPPC8-209ENST00000582509 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
TRAPPC8-209ENST00000582509 SYMPKQ92797 1274 aaKnown RBP11.2□□□□□ -0.62
TRAPPC8-209ENST00000582509 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAPPC8-209ENST00000582509 PRR7Q8TB68 274 aa11.19□□□□□ -0.62
TRAPPC8-209ENST00000582509 DXOO77932 396 aaKnown RBP11.18□□□□□ -0.62
TRAPPC8-209ENST00000582509 JUNDP17535 347 aa11.18□□□□□ -0.62
TRAPPC8-209ENST00000582509 RNF223E7ERA6 249 aa11.17□□□□□ -0.62
TRAPPC8-209ENST00000582509 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
TRAPPC8-209ENST00000582509 QPCTQ16769 361 aa11.16□□□□□ -0.62
TRAPPC8-209ENST00000582509 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC8-209ENST00000582509 HELBQ8NG08 1087 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC8-209ENST00000582509 CABLES1Q8TDN4 633 aa11.16□□□□□ -0.62
TRAPPC8-209ENST00000582509 TMEM132AQ24JP5 1023 aa11.15□□□□□ -0.62
TRAPPC8-209ENST00000582509 PRDM9Q9NQV7 894 aa11.15□□□□□ -0.62
TRAPPC8-209ENST00000582509 PTPRNQ16849 979 aa11.13□□□□□ -0.63
TRAPPC8-209ENST00000582509 CFAP99D6REC4 459 aa11.12□□□□□ -0.63
TRAPPC8-209ENST00000582509 RTL5Q5HYW3 569 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC8-209ENST00000582509 FCF1Q9Y324 198 aaKnown RBP11.12□□□□□ -0.63
TRAPPC8-209ENST00000582509 TSC1Q92574 1164 aa11.11□□□□□ -0.63
TRAPPC8-209ENST00000582509 PPEF1O14829 653 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-209ENST00000582509 ZBTB24O43167 697 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-209ENST00000582509 CCNYL3P0C7X3 344 aa11.1□□□□□ -0.63
TRAPPC8-209ENST00000582509 TMEM259Q4ZIN3 620 aa11.1□□□□□ -0.63
TRAPPC8-209ENST00000582509 LYPD8Q6UX82 237 aa11.1□□□□□ -0.63
TRAPPC8-209ENST00000582509 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
TRAPPC8-209ENST00000582509 V9GY48 417 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-209ENST00000582509 RFC5P40937 340 aa11.08□□□□□ -0.64
TRAPPC8-209ENST00000582509 RPIAP49247 311 aa11.08□□□□□ -0.64
TRAPPC8-209ENST00000582509 CCDC24Q8N4L8 307 aa11.07□□□□□ -0.64
TRAPPC8-209ENST00000582509 SLC19A1P41440 591 aa11.06□□□□□ -0.64
TRAPPC8-209ENST00000582509 EVA1BQ9NVM1 165 aa11.06□□□□□ -0.64
TRAPPC8-209ENST00000582509 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
TRAPPC8-209ENST00000582509 AP1G2O75843 785 aa11.04□□□□□ -0.64
TRAPPC8-209ENST00000582509 CD2BP2O95400 341 aaKnown RBP11.04□□□□□ -0.64
TRAPPC8-209ENST00000582509 KCNH2Q12809 1159 aa11.03□□□□□ -0.64
TRAPPC8-209ENST00000582509 BANK1Q8NDB2 785 aa11.02□□□□□ -0.65
TRAPPC8-209ENST00000582509 CTHP32929 405 aa11.01□□□□□ -0.65
TRAPPC8-209ENST00000582509 CTDSPL2Q05D32 466 aa11.01□□□□□ -0.65
TRAPPC8-209ENST00000582509 PLA2G2CQ5R387 149 aa11.01□□□□□ -0.65
TRAPPC8-209ENST00000582509 FBXO31Q5XUX0 539 aaPredicted RBP11□□□□□ -0.65
TRAPPC8-209ENST00000582509 LIAT1Q6ZQX7 453 aa11□□□□□ -0.65
TRAPPC8-209ENST00000582509 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
TRAPPC8-209ENST00000582509 APBB1O00213 710 aa10.99□□□□□ -0.65
TRAPPC8-209ENST00000582509 PER1O15534 1290 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC8-209ENST00000582509 F12P00748 615 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC8-209ENST00000582509 USP17L8P0C7I0 530 aa10.99□□□□□ -0.65
TRAPPC8-209ENST00000582509 SPRYD7Q5W111 196 aa10.99□□□□□ -0.65
TRAPPC8-209ENST00000582509 PNMA1Q8ND90 353 aa10.99□□□□□ -0.65
TRAPPC8-209ENST00000582509 SOCS7O14512 581 aa10.98□□□□□ -0.65
TRAPPC8-209ENST00000582509 TRIM32Q13049 653 aa10.98□□□□□ -0.65
TRAPPC8-209ENST00000582509 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
TRAPPC8-209ENST00000582509 UNC93B1Q9H1C4 597 aa10.98□□□□□ -0.65
TRAPPC8-209ENST00000582509 EMID1Q96A84 441 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC8-209ENST00000582509 WNT7BP56706 349 aa10.95□□□□□ -0.66
TRAPPC8-209ENST00000582509 ZNF697Q5TEC3 545 aa10.94□□□□□ -0.66
TRAPPC8-209ENST00000582509 PTCRAQ6ISU1 281 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC8-209ENST00000582509 LRRN4Q8WUT4 740 aa10.94□□□□□ -0.66
TRAPPC8-209ENST00000582509 GPKOWQ92917 476 aaPredicted RBP eCLIP10.94□□□□□ -0.66
TRAPPC8-209ENST00000582509 MAP10Q9P2G4 905 aa10.94□□□□□ -0.66
TRAPPC8-209ENST00000582509 NBPF14Q5TI25 921 aa10.93□□□□□ -0.66
TRAPPC8-209ENST00000582509 ZC3H4Q9UPT8 1303 aaKnown RBP10.92□□□□□ -0.66
TRAPPC8-209ENST00000582509 PRM3Q9NNZ6 103 aa10.91□□□□□ -0.66
TRAPPC8-209ENST00000582509 NR6A1Q15406 480 aa10.89□□□□□ -0.67
TRAPPC8-209ENST00000582509 ZNF511Q8NB15 262 aa10.89□□□□□ -0.67
TRAPPC8-209ENST00000582509 BAP1Q92560 729 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms