RNA–Protein interactions for RNA: ENST00000568682.5

KARS-210, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-210ENST00000568682 CFTRP13569 1480 aa11.27□□□□□ -0.6
KARS-210ENST00000568682 ACTN4O43707 911 aaKnown RBP11.27□□□□□ -0.61
KARS-210ENST00000568682 BCAMP50895 628 aa11.27□□□□□ -0.61
KARS-210ENST00000568682 PPP4CP60510 307 aa11.27□□□□□ -0.61
KARS-210ENST00000568682 HPS5Q9UPZ3 1129 aa11.27□□□□□ -0.61
KARS-210ENST00000568682 FANCD2Q9BXW9 1451 aa11.26□□□□□ -0.61
KARS-210ENST00000568682 FUT2Q10981 343 aa11.26□□□□□ -0.61
KARS-210ENST00000568682 PCDH10Q9P2E7 1040 aa11.26□□□□□ -0.61
KARS-210ENST00000568682 NDUFV2P19404 249 aa11.25□□□□□ -0.61
KARS-210ENST00000568682 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
KARS-210ENST00000568682 PPP2R2DQ66LE6 453 aa11.25□□□□□ -0.61
KARS-210ENST00000568682 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
KARS-210ENST00000568682 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
KARS-210ENST00000568682 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
KARS-210ENST00000568682 FDX1P10109 184 aa11.24□□□□□ -0.61
KARS-210ENST00000568682 PRPF38BQ5VTL8 546 aaKnown RBP11.24□□□□□ -0.61
KARS-210ENST00000568682 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
KARS-210ENST00000568682 WDR62O43379 1518 aa11.22□□□□□ -0.61
KARS-210ENST00000568682 LILRB3O75022 631 aa11.22□□□□□ -0.61
KARS-210ENST00000568682 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
KARS-210ENST00000568682 NYAP1Q6ZVC0 841 aa11.21□□□□□ -0.61
KARS-210ENST00000568682 KCTD12Q96CX2 325 aaKnown RBP11.21□□□□□ -0.61
KARS-210ENST00000568682 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
KARS-210ENST00000568682 APLP1P51693 650 aa11.2□□□□□ -0.62
KARS-210ENST00000568682 MORN1Q5T089 497 aa11.2□□□□□ -0.62
KARS-210ENST00000568682 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
KARS-210ENST00000568682 FLIIQ13045 1269 aa11.19□□□□□ -0.62
KARS-210ENST00000568682 ZBTB3Q9H5J0 574 aa11.19□□□□□ -0.62
KARS-210ENST00000568682 WBP1LQ9NX94 342 aa11.19□□□□□ -0.62
KARS-210ENST00000568682 PCDHGC3Q9UN70 934 aa11.19□□□□□ -0.62
KARS-210ENST00000568682 RFC5P40937 340 aa11.18□□□□□ -0.62
KARS-210ENST00000568682 HLA-CQ95604 372 aa11.18□□□□□ -0.62
KARS-210ENST00000568682 ARXQ96QS3 562 aa11.18□□□□□ -0.62
KARS-210ENST00000568682 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
KARS-210ENST00000568682 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
KARS-210ENST00000568682 QPCTQ16769 361 aa11.17□□□□□ -0.62
KARS-210ENST00000568682 TMEM259Q4ZIN3 620 aa11.17□□□□□ -0.62
KARS-210ENST00000568682 HRCP23327 699 aa11.16□□□□□ -0.62
KARS-210ENST00000568682 MTMR2Q13614 643 aa11.16□□□□□ -0.62
KARS-210ENST00000568682 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
KARS-210ENST00000568682 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
KARS-210ENST00000568682 BANK1Q8NDB2 785 aa11.16□□□□□ -0.62
KARS-210ENST00000568682 MYT1LQ9UL68 1186 aa11.16□□□□□ -0.62
KARS-210ENST00000568682 Q3C1V9 767 aa11.15□□□□□ -0.62
KARS-210ENST00000568682 C14orf37Q86TY3 774 aa11.15□□□□□ -0.62
KARS-210ENST00000568682 SALL2Q9Y467 1007 aaPredicted RBP11.15□□□□□ -0.62
KARS-210ENST00000568682 PCDHB3Q9Y5E6 796 aa11.15□□□□□ -0.62
KARS-210ENST00000568682 PUS10Q3MIT2 529 aaKnown RBP11.14□□□□□ -0.63
KARS-210ENST00000568682 CABLES1Q8TDN4 633 aa11.14□□□□□ -0.63
KARS-210ENST00000568682 SLC27A5Q9Y2P5 690 aa11.14□□□□□ -0.63
KARS-210ENST00000568682 NUTM2BA6NNL0 878 aaPredicted RBP11.13□□□□□ -0.63
KARS-210ENST00000568682 NUTM2EB1AL46 878 aaPredicted RBP11.13□□□□□ -0.63
KARS-210ENST00000568682 RTL5Q5HYW3 569 aaPredicted RBP11.13□□□□□ -0.63
KARS-210ENST00000568682 NUTM2DQ5VT03 806 aaPredicted RBP11.13□□□□□ -0.63
KARS-210ENST00000568682 NUTM2AQ8IVF1 878 aaPredicted RBP11.13□□□□□ -0.63
KARS-210ENST00000568682 NR1I2O75469 434 aa11.12□□□□□ -0.63
KARS-210ENST00000568682 C6orf229H3BNL8 230 aa11.11□□□□□ -0.63
KARS-210ENST00000568682 SOCS7O14512 581 aa11.1□□□□□ -0.63
KARS-210ENST00000568682 MCM6Q14566 821 aa11.1□□□□□ -0.63
KARS-210ENST00000568682 RETREG3Q86VR2 466 aa11.1□□□□□ -0.63
KARS-210ENST00000568682 TOPBP1Q92547 1522 aa11.09□□□□□ -0.63
KARS-210ENST00000568682 BLOC1S3Q6QNY0 202 aa11.09□□□□□ -0.63
KARS-210ENST00000568682 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
KARS-210ENST00000568682 PTPN5P54829 565 aa11.08□□□□□ -0.64
KARS-210ENST00000568682 BRICD5Q6PL45 260 aa11.08□□□□□ -0.64
KARS-210ENST00000568682 SPNS2Q8IVW8 549 aa11.08□□□□□ -0.64
KARS-210ENST00000568682 THAP11Q96EK4 314 aa11.08□□□□□ -0.64
KARS-210ENST00000568682 FMNL1O95466 1100 aaPredicted RBP11.07□□□□□ -0.64
KARS-210ENST00000568682 CFAP99D6REC4 459 aa11.06□□□□□ -0.64
KARS-210ENST00000568682 DESI1Q6ICB0 168 aa11.06□□□□□ -0.64
KARS-210ENST00000568682 HELBQ8NG08 1087 aaPredicted RBP11.06□□□□□ -0.64
KARS-210ENST00000568682 DNMBPQ6XZF7 1577 aa11.06□□□□□ -0.64
KARS-210ENST00000568682 ZNF608Q9ULD9 1512 aaPredicted RBP11.05□□□□□ -0.64
KARS-210ENST00000568682 AP1G2O75843 785 aa11.05□□□□□ -0.64
KARS-210ENST00000568682 RNF19BQ6ZMZ0 732 aa11.05□□□□□ -0.64
KARS-210ENST00000568682 SYMPKQ92797 1274 aaKnown RBP11.05□□□□□ -0.64
KARS-210ENST00000568682 RNF166Q96A37 237 aaPredicted RBP11.05□□□□□ -0.64
KARS-210ENST00000568682 USB1Q9BQ65 265 aaKnown RBP11.05□□□□□ -0.64
KARS-210ENST00000568682 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
KARS-210ENST00000568682 USP17L8P0C7I0 530 aa11.03□□□□□ -0.64
KARS-210ENST00000568682 MTRQ99707 1265 aa11.03□□□□□ -0.64
KARS-210ENST00000568682 HCSTQ9UBK5 93 aa11.03□□□□□ -0.64
KARS-210ENST00000568682 APBB1O00213 710 aa11.02□□□□□ -0.65
KARS-210ENST00000568682 COPS2P61201 443 aa11.02□□□□□ -0.65
KARS-210ENST00000568682 IL21Q9HBE4 155 aa11.02□□□□□ -0.65
KARS-210ENST00000568682 SNRKQ9NRH2 765 aa11.02□□□□□ -0.65
KARS-210ENST00000568682 CUX1P39880 1505 aa11.01□□□□□ -0.65
KARS-210ENST00000568682 ZPR1O75312 459 aa11.01□□□□□ -0.65
KARS-210ENST00000568682 MSS51Q4VC12 460 aa11.01□□□□□ -0.65
KARS-210ENST00000568682 TJAP1Q5JTD0 557 aa11.01□□□□□ -0.65
KARS-210ENST00000568682 MTMR14Q8NCE2 650 aa11.01□□□□□ -0.65
KARS-210ENST00000568682 ZMYND15Q9H091 742 aa11.01□□□□□ -0.65
KARS-210ENST00000568682 EIF4G3O43432 1585 aaKnown RBP11.01□□□□□ -0.65
KARS-210ENST00000568682 TARBP1Q13395 1621 aaKnown RBP11.01□□□□□ -0.65
KARS-210ENST00000568682 RAD54L2Q9Y4B4 1467 aa11□□□□□ -0.65
KARS-210ENST00000568682 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
KARS-210ENST00000568682 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
KARS-210ENST00000568682 CTDSPL2Q05D32 466 aa10.99□□□□□ -0.65
KARS-210ENST00000568682 SPSB2Q99619 263 aa10.99□□□□□ -0.65
KARS-210ENST00000568682 A6NJR5 290 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms