RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PPP2R2DQ66LE6 453 aa7.9□□□□□ -1.14
LINC00561-201ENST00000565815 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.9□□□□□ -1.14
LINC00561-201ENST00000565815 COG6Q9Y2V7 657 aa7.9□□□□□ -1.14
LINC00561-201ENST00000565815 APBB1O00213 710 aa7.9□□□□□ -1.15
LINC00561-201ENST00000565815 GPR37L1O60883 481 aa7.9□□□□□ -1.15
LINC00561-201ENST00000565815 HPS5Q9UPZ3 1129 aa7.9□□□□□ -1.15
LINC00561-201ENST00000565815 USP17L8P0C7I0 530 aa7.89□□□□□ -1.15
LINC00561-201ENST00000565815 TK2O00142 265 aa7.89□□□□□ -1.15
LINC00561-201ENST00000565815 ZNF777Q9ULD5 760 aaPredicted RBP7.89□□□□□ -1.15
LINC00561-201ENST00000565815 SLF2Q8IX21 1173 aa7.88□□□□□ -1.15
LINC00561-201ENST00000565815 WNT2BQ93097 391 aa7.88□□□□□ -1.15
LINC00561-201ENST00000565815 FLIIQ13045 1269 aa7.87□□□□□ -1.15
LINC00561-201ENST00000565815 KCTD12Q96CX2 325 aaKnown RBP7.87□□□□□ -1.15
LINC00561-201ENST00000565815 CC2D2AQ9P2K1 1620 aa7.87□□□□□ -1.15
LINC00561-201ENST00000565815 SOWAHBA6NEL2 793 aa7.87□□□□□ -1.15
LINC00561-201ENST00000565815 MTMR2Q13614 643 aa7.87□□□□□ -1.15
LINC00561-201ENST00000565815 MORN1Q5T089 497 aa7.87□□□□□ -1.15
LINC00561-201ENST00000565815 LAPTM4BQ86VI4 370 aa7.87□□□□□ -1.15
LINC00561-201ENST00000565815 GJD4Q96KN9 370 aaPredicted RBP7.87□□□□□ -1.15
LINC00561-201ENST00000565815 TLL1O43897 1013 aa7.87□□□□□ -1.15
LINC00561-201ENST00000565815 COPS2P61201 443 aa7.87□□□□□ -1.15
LINC00561-201ENST00000565815 PRDM9Q9NQV7 894 aa7.87□□□□□ -1.15
LINC00561-201ENST00000565815 POM121CA8CG34 1229 aa7.86□□□□□ -1.15
LINC00561-201ENST00000565815 HDGFP51858 240 aaKnown RBP7.86□□□□□ -1.15
LINC00561-201ENST00000565815 FNBP4Q8N3X1 1017 aaPredicted RBP7.86□□□□□ -1.15
LINC00561-201ENST00000565815 ZBTB3Q9H5J0 574 aa7.86□□□□□ -1.15
LINC00561-201ENST00000565815 DIXDC1Q155Q3 683 aa7.86□□□□□ -1.15
LINC00561-201ENST00000565815 POTEGQ6S5H5 508 aa7.86□□□□□ -1.15
LINC00561-201ENST00000565815 ATP6V1AP38606 617 aa7.85□□□□□ -1.15
LINC00561-201ENST00000565815 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
LINC00561-201ENST00000565815 DCAF1Q9Y4B6 1507 aa7.85□□□□□ -1.15
LINC00561-201ENST00000565815 ABL2P42684 1182 aa7.84□□□□□ -1.15
LINC00561-201ENST00000565815 ANKK1Q8NFD2 765 aa7.84□□□□□ -1.15
LINC00561-201ENST00000565815 SPDYE5A6NIY4 337 aa7.84□□□□□ -1.15
LINC00561-201ENST00000565815 PROSER2Q86WR7 435 aaPredicted RBP7.84□□□□□ -1.15
LINC00561-201ENST00000565815 CCDC82Q8N4S0 544 aa7.84□□□□□ -1.15
LINC00561-201ENST00000565815 PRR7Q8TB68 274 aa7.84□□□□□ -1.15
LINC00561-201ENST00000565815 GOLGA8CPA6NN73 597 aa7.83□□□□□ -1.16
LINC00561-201ENST00000565815 TRAK2O60296 914 aa7.83□□□□□ -1.16
LINC00561-201ENST00000565815 PTPN5P54829 565 aa7.83□□□□□ -1.16
LINC00561-201ENST00000565815 PPP4CP60510 307 aa7.83□□□□□ -1.16
LINC00561-201ENST00000565815 CDAN1Q8IWY9 1227 aa7.83□□□□□ -1.16
LINC00561-201ENST00000565815 ACTN4O43707 911 aaKnown RBP7.82□□□□□ -1.16
LINC00561-201ENST00000565815 USP46P62068 366 aa7.82□□□□□ -1.16
LINC00561-201ENST00000565815 NR6A1Q15406 480 aa7.82□□□□□ -1.16
LINC00561-201ENST00000565815 SCUBE3Q8IX30 993 aa7.82□□□□□ -1.16
LINC00561-201ENST00000565815 THSD4Q6ZMP0 1018 aa7.81□□□□□ -1.16
LINC00561-201ENST00000565815 EIF4G1Q04637 1599 aaKnown RBP7.81□□□□□ -1.16
LINC00561-201ENST00000565815 TUSC1Q2TAM9 212 aa7.8□□□□□ -1.16
LINC00561-201ENST00000565815 PRPF38BQ5VTL8 546 aaKnown RBP7.8□□□□□ -1.16
LINC00561-201ENST00000565815 IRF5Q13568 498 aa7.8□□□□□ -1.16
LINC00561-201ENST00000565815 ADAMTS19Q8TE59 1207 aa7.8□□□□□ -1.16
LINC00561-201ENST00000565815 PCDHB3Q9Y5E6 796 aa7.8□□□□□ -1.16
LINC00561-201ENST00000565815 GJA5P36382 358 aa7.8□□□□□ -1.16
LINC00561-201ENST00000565815 RSPH4AQ5TD94 716 aa7.8□□□□□ -1.16
LINC00561-201ENST00000565815 ZNF516Q92618 1163 aa7.8□□□□□ -1.16
LINC00561-201ENST00000565815 MAP10Q9P2G4 905 aa7.8□□□□□ -1.16
LINC00561-201ENST00000565815 TSR3Q9UJK0 312 aaKnown RBP7.8□□□□□ -1.16
LINC00561-201ENST00000565815 CUX2O14529 1486 aa7.79□□□□□ -1.16
LINC00561-201ENST00000565815 THAP11Q96EK4 314 aa7.79□□□□□ -1.16
LINC00561-201ENST00000565815 TMEM259Q4ZIN3 620 aa7.79□□□□□ -1.16
LINC00561-201ENST00000565815 ERICH6Q7L0X2 663 aa7.79□□□□□ -1.16
LINC00561-201ENST00000565815 STAC3Q96MF2 364 aa7.79□□□□□ -1.16
LINC00561-201ENST00000565815 A6NJR5 290 aa7.78□□□□□ -1.16
LINC00561-201ENST00000565815 KMT5BQ4FZB7 885 aa7.78□□□□□ -1.16
LINC00561-201ENST00000565815 VAC14Q08AM6 782 aa7.77□□□□□ -1.17
LINC00561-201ENST00000565815 BANK1Q8NDB2 785 aa7.77□□□□□ -1.17
LINC00561-201ENST00000565815 NKX2-3Q8TAU0 364 aa7.77□□□□□ -1.17
LINC00561-201ENST00000565815 SLC4A3P48751 1232 aa7.76□□□□□ -1.17
LINC00561-201ENST00000565815 FAM160A2Q8N612 972 aaPredicted RBP7.76□□□□□ -1.17
LINC00561-201ENST00000565815 BRICD5Q6PL45 260 aa7.76□□□□□ -1.17
LINC00561-201ENST00000565815 RETREG3Q86VR2 466 aa7.76□□□□□ -1.17
LINC00561-201ENST00000565815 ZNF330Q9Y3S2 320 aaPredicted RBP7.76□□□□□ -1.17
LINC00561-201ENST00000565815 HELBQ8NG08 1087 aaPredicted RBP7.75□□□□□ -1.17
LINC00561-201ENST00000565815 RAD21O60216 631 aa7.75□□□□□ -1.17
LINC00561-201ENST00000565815 USB1Q9BQ65 265 aaKnown RBP7.74□□□□□ -1.17
LINC00561-201ENST00000565815 MTRQ99707 1265 aa7.74□□□□□ -1.17
LINC00561-201ENST00000565815 GRIPAP1Q4V328 841 aa7.73□□□□□ -1.17
LINC00561-201ENST00000565815 PLSCR2Q9NRY7 297 aa7.73□□□□□ -1.17
LINC00561-201ENST00000565815 GLMNQ92990 594 aa7.72□□□□□ -1.17
LINC00561-201ENST00000565815 SPSB2Q99619 263 aa7.71□□□□□ -1.18
LINC00561-201ENST00000565815 NDUFB9Q9Y6M9 179 aa7.7□□□□□ -1.18
LINC00561-201ENST00000565815 ZCCHC6Q5VYS8 1495 aaKnown RBP7.69□□□□□ -1.18
LINC00561-201ENST00000565815 PPEF1O14829 653 aaPredicted RBP7.69□□□□□ -1.18
LINC00561-201ENST00000565815 TJAP1Q5JTD0 557 aa7.69□□□□□ -1.18
LINC00561-201ENST00000565815 PTCRAQ6ISU1 281 aaPredicted RBP7.69□□□□□ -1.18
LINC00561-201ENST00000565815 F12P00748 615 aaPredicted RBP7.69□□□□□ -1.18
LINC00561-201ENST00000565815 CARNS1A5YM72 827 aa7.68□□□□□ -1.18
LINC00561-201ENST00000565815 ZPR1O75312 459 aa7.68□□□□□ -1.18
LINC00561-201ENST00000565815 FMNL1O95466 1100 aaPredicted RBP7.68□□□□□ -1.18
LINC00561-201ENST00000565815 LYPD8Q6UX82 237 aa7.68□□□□□ -1.18
LINC00561-201ENST00000565815 OCSTAMPQ9BR26 566 aa7.68□□□□□ -1.18
LINC00561-201ENST00000565815 S1PR4O95977 384 aa7.67□□□□□ -1.18
LINC00561-201ENST00000565815 UCN2Q96RP3 112 aa7.67□□□□□ -1.18
LINC00561-201ENST00000565815 FBXO45P0C2W1 286 aa7.67□□□□□ -1.18
LINC00561-201ENST00000565815 CTHP32929 405 aa7.67□□□□□ -1.18
LINC00561-201ENST00000565815 MYT1LQ9UL68 1186 aa7.67□□□□□ -1.18
LINC00561-201ENST00000565815 NR1I2O75469 434 aa7.66□□□□□ -1.18
LINC00561-201ENST00000565815 RFX1P22670 979 aa7.66□□□□□ -1.18
LINC00561-201ENST00000565815 Q3C1V9 767 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms