RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 BRICD5Q6PL45 260 aa6.48□□□□□ -1.37
CHD9-207ENST00000562806 RETREG3Q86VR2 466 aa6.48□□□□□ -1.37
CHD9-207ENST00000562806 ZBTB3Q9H5J0 574 aa6.48□□□□□ -1.37
CHD9-207ENST00000562806 C6orf229H3BNL8 230 aa6.47□□□□□ -1.37
CHD9-207ENST00000562806 TMEM132AQ24JP5 1023 aa6.47□□□□□ -1.37
CHD9-207ENST00000562806 MSS51Q4VC12 460 aa6.47□□□□□ -1.37
CHD9-207ENST00000562806 THAP11Q96EK4 314 aa6.47□□□□□ -1.37
CHD9-207ENST00000562806 USB1Q9BQ65 265 aaKnown RBP6.47□□□□□ -1.37
CHD9-207ENST00000562806 ATP1B4Q9UN42 357 aaPredicted RBP6.47□□□□□ -1.37
CHD9-207ENST00000562806 NDUFV2P19404 249 aa6.46□□□□□ -1.38
CHD9-207ENST00000562806 DESI1Q6ICB0 168 aa6.45□□□□□ -1.38
CHD9-207ENST00000562806 ZNF516Q92618 1163 aa6.45□□□□□ -1.38
CHD9-207ENST00000562806 SLC6A16Q9GZN6 736 aa6.45□□□□□ -1.38
CHD9-207ENST00000562806 NUTM2BA6NNL0 878 aaPredicted RBP6.44□□□□□ -1.38
CHD9-207ENST00000562806 NUTM2EB1AL46 878 aaPredicted RBP6.44□□□□□ -1.38
CHD9-207ENST00000562806 RGS20O76081 388 aa6.44□□□□□ -1.38
CHD9-207ENST00000562806 NUTM2DQ5VT03 806 aaPredicted RBP6.44□□□□□ -1.38
CHD9-207ENST00000562806 NUTM2AQ8IVF1 878 aaPredicted RBP6.44□□□□□ -1.38
CHD9-207ENST00000562806 POLR3EQ9NVU0 708 aa6.44□□□□□ -1.38
CHD9-207ENST00000562806 PCDHGC3Q9UN70 934 aa6.44□□□□□ -1.38
CHD9-207ENST00000562806 A0A0G2JS52 829 aa6.43□□□□□ -1.38
CHD9-207ENST00000562806 LILRB3O75022 631 aa6.43□□□□□ -1.38
CHD9-207ENST00000562806 RNF19BQ6ZMZ0 732 aa6.43□□□□□ -1.38
CHD9-207ENST00000562806 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.43□□□□□ -1.38
CHD9-207ENST00000562806 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.43□□□□□ -1.38
CHD9-207ENST00000562806 LIMD1Q9UGP4 676 aa6.43□□□□□ -1.38
CHD9-207ENST00000562806 HRCP23327 699 aa6.42□□□□□ -1.38
CHD9-207ENST00000562806 GUCA2AQ02747 115 aa6.42□□□□□ -1.38
CHD9-207ENST00000562806 PPP2R2DQ66LE6 453 aa6.42□□□□□ -1.38
CHD9-207ENST00000562806 HELBQ8NG08 1087 aaPredicted RBP6.42□□□□□ -1.38
CHD9-207ENST00000562806 HLA-CQ95604 372 aa6.42□□□□□ -1.38
CHD9-207ENST00000562806 PCDHB15Q9Y5E8 787 aa6.42□□□□□ -1.38
CHD9-207ENST00000562806 JUNDP17535 347 aa6.41□□□□□ -1.38
CHD9-207ENST00000562806 MMP16P51512 607 aa6.41□□□□□ -1.38
CHD9-207ENST00000562806 CSPP1Q1MSJ5 1256 aa6.41□□□□□ -1.38
CHD9-207ENST00000562806 TMEM259Q4ZIN3 620 aa6.41□□□□□ -1.38
CHD9-207ENST00000562806 ANKLE1Q8NAG6 615 aa6.41□□□□□ -1.38
CHD9-207ENST00000562806 TLL1O43897 1013 aa6.4□□□□□ -1.38
CHD9-207ENST00000562806 DXOO77932 396 aaKnown RBP6.4□□□□□ -1.38
CHD9-207ENST00000562806 PPP1R18Q6NYC8 613 aa6.4□□□□□ -1.38
CHD9-207ENST00000562806 FAM160A2Q8N612 972 aaPredicted RBP6.4□□□□□ -1.38
CHD9-207ENST00000562806 NKX2-3Q8TAU0 364 aa6.4□□□□□ -1.38
CHD9-207ENST00000562806 PRR7Q8TB68 274 aa6.4□□□□□ -1.38
CHD9-207ENST00000562806 S1PR4O95977 384 aa6.39□□□□□ -1.39
CHD9-207ENST00000562806 PTPRNQ16849 979 aa6.39□□□□□ -1.39
CHD9-207ENST00000562806 PROCA1Q8NCQ7 364 aaPredicted RBP6.39□□□□□ -1.39
CHD9-207ENST00000562806 APBB1O00213 710 aa6.38□□□□□ -1.39
CHD9-207ENST00000562806 QPCTQ16769 361 aa6.38□□□□□ -1.39
CHD9-207ENST00000562806 SYMPKQ92797 1274 aaKnown RBP6.38□□□□□ -1.39
CHD9-207ENST00000562806 RNF223E7ERA6 249 aa6.37□□□□□ -1.39
CHD9-207ENST00000562806 LYPD8Q6UX82 237 aa6.37□□□□□ -1.39
CHD9-207ENST00000562806 BANK1Q8NDB2 785 aa6.37□□□□□ -1.39
CHD9-207ENST00000562806 CABLES1Q8TDN4 633 aa6.37□□□□□ -1.39
CHD9-207ENST00000562806 ZBTB24O43167 697 aaPredicted RBP6.36□□□□□ -1.39
CHD9-207ENST00000562806 CCNYL3P0C7X3 344 aa6.36□□□□□ -1.39
CHD9-207ENST00000562806 RFC5P40937 340 aa6.36□□□□□ -1.39
CHD9-207ENST00000562806 RTL5Q5HYW3 569 aaPredicted RBP6.36□□□□□ -1.39
CHD9-207ENST00000562806 PNMA1Q8ND90 353 aa6.36□□□□□ -1.39
CHD9-207ENST00000562806 NUDT12Q9BQG2 462 aa6.36□□□□□ -1.39
CHD9-207ENST00000562806 CFAP99D6REC4 459 aa6.35□□□□□ -1.39
CHD9-207ENST00000562806 SOCS7O14512 581 aa6.35□□□□□ -1.39
CHD9-207ENST00000562806 RPIAP49247 311 aa6.35□□□□□ -1.39
CHD9-207ENST00000562806 ARMC2Q8NEN0 867 aa6.35□□□□□ -1.39
CHD9-207ENST00000562806 TSC1Q92574 1164 aa6.35□□□□□ -1.39
CHD9-207ENST00000562806 EVA1BQ9NVM1 165 aa6.35□□□□□ -1.39
CHD9-207ENST00000562806 V9GY48 417 aaPredicted RBP6.35□□□□□ -1.39
CHD9-207ENST00000562806 CD2BP2O95400 341 aaKnown RBP6.34□□□□□ -1.39
CHD9-207ENST00000562806 FCF1Q9Y324 198 aaKnown RBP6.34□□□□□ -1.39
CHD9-207ENST00000562806 AP1G2O75843 785 aa6.33□□□□□ -1.4
CHD9-207ENST00000562806 KCNH2Q12809 1159 aa6.33□□□□□ -1.4
CHD9-207ENST00000562806 PRM3Q9NNZ6 103 aa6.33□□□□□ -1.4
CHD9-207ENST00000562806 PRDM9Q9NQV7 894 aa6.33□□□□□ -1.4
CHD9-207ENST00000562806 SLC19A1P41440 591 aa6.32□□□□□ -1.4
CHD9-207ENST00000562806 CCDC24Q8N4L8 307 aa6.32□□□□□ -1.4
CHD9-207ENST00000562806 GPKOWQ92917 476 aaPredicted RBP eCLIP6.31□□□□□ -1.4
CHD9-207ENST00000562806 PPEF1O14829 653 aaPredicted RBP6.3□□□□□ -1.4
CHD9-207ENST00000562806 CTHP32929 405 aa6.3□□□□□ -1.4
CHD9-207ENST00000562806 CTDSPL2Q05D32 466 aa6.3□□□□□ -1.4
CHD9-207ENST00000562806 FLIIQ13045 1269 aa6.3□□□□□ -1.4
CHD9-207ENST00000562806 PRKD2Q9BZL6 878 aa6.3□□□□□ -1.4
CHD9-207ENST00000562806 ZC3H4Q9UPT8 1303 aaKnown RBP6.29□□□□□ -1.4
CHD9-207ENST00000562806 F12P00748 615 aaPredicted RBP6.29□□□□□ -1.4
CHD9-207ENST00000562806 USP17L8P0C7I0 530 aa6.29□□□□□ -1.4
CHD9-207ENST00000562806 WNT7BP56706 349 aa6.28□□□□□ -1.4
CHD9-207ENST00000562806 NBPF14Q5TI25 921 aa6.28□□□□□ -1.4
CHD9-207ENST00000562806 SPRYD7Q5W111 196 aa6.28□□□□□ -1.4
CHD9-207ENST00000562806 ZNF598Q86UK7 904 aaKnown RBP6.28□□□□□ -1.4
CHD9-207ENST00000562806 UNC93B1Q9H1C4 597 aa6.28□□□□□ -1.4
CHD9-207ENST00000562806 TRIM32Q13049 653 aa6.27□□□□□ -1.41
CHD9-207ENST00000562806 PER1O15534 1290 aaPredicted RBP6.26□□□□□ -1.41
CHD9-207ENST00000562806 LIAT1Q6ZQX7 453 aa6.26□□□□□ -1.41
CHD9-207ENST00000562806 GPSM3Q9Y4H4 160 aa6.26□□□□□ -1.41
CHD9-207ENST00000562806 LAPTM4AQ15012 233 aa6.25□□□□□ -1.41
CHD9-207ENST00000562806 PLA2G2CQ5R387 149 aa6.25□□□□□ -1.41
CHD9-207ENST00000562806 FBXO31Q5XUX0 539 aaPredicted RBP6.25□□□□□ -1.41
CHD9-207ENST00000562806 LRRN4Q8WUT4 740 aa6.25□□□□□ -1.41
CHD9-207ENST00000562806 ZNF592Q92610 1267 aa6.25□□□□□ -1.41
CHD9-207ENST00000562806 FKBPLQ9UIM3 349 aa6.25□□□□□ -1.41
CHD9-207ENST00000562806 ZNF697Q5TEC3 545 aa6.24□□□□□ -1.41
CHD9-207ENST00000562806 PTCRAQ6ISU1 281 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms