RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 HOXA2O43364 376 aa7.83□□□□□ -1.16
TMEM116-211ENST00000550233 LMOD1P29536 600 aaPredicted RBP7.83□□□□□ -1.16
TMEM116-211ENST00000550233 DOK7Q18PE1 504 aa7.83□□□□□ -1.16
TMEM116-211ENST00000550233 PPP4R3BQ5MIZ7 849 aa7.83□□□□□ -1.16
TMEM116-211ENST00000550233 TATDN2Q93075 761 aa7.83□□□□□ -1.16
TMEM116-211ENST00000550233 BCL2L12Q9HB09 334 aa7.83□□□□□ -1.16
TMEM116-211ENST00000550233 FAM198AQ9UFP1 575 aa7.83□□□□□ -1.16
TMEM116-211ENST00000550233 GCGRP47871 477 aa7.82□□□□□ -1.16
TMEM116-211ENST00000550233 TRIM34Q9BYJ4 488 aa7.82□□□□□ -1.16
TMEM116-211ENST00000550233 PNMA3Q9UL41 463 aa7.82□□□□□ -1.16
TMEM116-211ENST00000550233 GNEQ9Y223 722 aaKnown RBP7.82□□□□□ -1.16
TMEM116-211ENST00000550233 IVNS1ABPQ9Y6Y0 642 aa7.82□□□□□ -1.16
TMEM116-211ENST00000550233 PTPREP23469 700 aa7.81□□□□□ -1.16
TMEM116-211ENST00000550233 VAC14Q08AM6 782 aa7.81□□□□□ -1.16
TMEM116-211ENST00000550233 SEMA3FQ13275 785 aa7.81□□□□□ -1.16
TMEM116-211ENST00000550233 MTMR2Q13614 643 aa7.81□□□□□ -1.16
TMEM116-211ENST00000550233 GRIPAP1Q4V328 841 aa7.81□□□□□ -1.16
TMEM116-211ENST00000550233 TSKSQ9UJT2 592 aa7.81□□□□□ -1.16
TMEM116-211ENST00000550233 TRIM6-TRIM34B2RNG4 842 aa7.8□□□□□ -1.16
TMEM116-211ENST00000550233 SLC4A3P48751 1232 aa7.8□□□□□ -1.16
TMEM116-211ENST00000550233 EMP3P54852 163 aa7.8□□□□□ -1.16
TMEM116-211ENST00000550233 CTDSPL2Q05D32 466 aa7.8□□□□□ -1.16
TMEM116-211ENST00000550233 MMRN1Q13201 1228 aa7.8□□□□□ -1.16
TMEM116-211ENST00000550233 SPNS2Q8IVW8 549 aa7.8□□□□□ -1.16
TMEM116-211ENST00000550233 TFIP11Q9UBB9 837 aaKnown RBP7.8□□□□□ -1.16
TMEM116-211ENST00000550233 NUDT7P0C024 238 aa7.79□□□□□ -1.16
TMEM116-211ENST00000550233 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
TMEM116-211ENST00000550233 GPR37L1O60883 481 aa7.78□□□□□ -1.16
TMEM116-211ENST00000550233 COL9A1P20849 921 aa7.78□□□□□ -1.16
TMEM116-211ENST00000550233 EIF4G2P78344 907 aaKnown RBP eCLIP7.78□□□□□ -1.16
TMEM116-211ENST00000550233 HMX1Q9NP08 348 aaPredicted RBP7.78□□□□□ -1.16
TMEM116-211ENST00000550233 MAFBQ9Y5Q3 323 aaPredicted RBP7.78□□□□□ -1.16
TMEM116-211ENST00000550233 SHROOM4Q9ULL8 1493 aa7.78□□□□□ -1.16
TMEM116-211ENST00000550233 TMEM88BA6NKF7 163 aa7.77□□□□□ -1.17
TMEM116-211ENST00000550233 ERCC3P19447 782 aa7.77□□□□□ -1.17
TMEM116-211ENST00000550233 ELOAQ14241 798 aaKnown RBP7.77□□□□□ -1.17
TMEM116-211ENST00000550233 SLF2Q8IX21 1173 aa7.77□□□□□ -1.17
TMEM116-211ENST00000550233 CCER1Q8TC90 406 aaPredicted RBP7.77□□□□□ -1.17
TMEM116-211ENST00000550233 ZNF428Q96B54 188 aa7.77□□□□□ -1.17
TMEM116-211ENST00000550233 UCN2Q96RP3 112 aa7.76□□□□□ -1.17
TMEM116-211ENST00000550233 PCDHGC3Q9UN70 934 aa7.76□□□□□ -1.17
TMEM116-211ENST00000550233 FAM205CA6NFA0 338 aa7.75□□□□□ -1.17
TMEM116-211ENST00000550233 ATP9BO43861 1147 aa7.75□□□□□ -1.17
TMEM116-211ENST00000550233 ARSIQ5FYB1 569 aa7.75□□□□□ -1.17
TMEM116-211ENST00000550233 NFATC2IPQ8NCF5 419 aa7.75□□□□□ -1.17
TMEM116-211ENST00000550233 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
TMEM116-211ENST00000550233 TSC1Q92574 1164 aa7.75□□□□□ -1.17
TMEM116-211ENST00000550233 KCNH8Q96L42 1107 aa7.75□□□□□ -1.17
TMEM116-211ENST00000550233 HDGFP51858 240 aaKnown RBP7.74□□□□□ -1.17
TMEM116-211ENST00000550233 LRRN4Q8WUT4 740 aa7.74□□□□□ -1.17
TMEM116-211ENST00000550233 C6orf229H3BNL8 230 aa7.73□□□□□ -1.17
TMEM116-211ENST00000550233 GPR153Q6NV75 609 aa7.72□□□□□ -1.17
TMEM116-211ENST00000550233 ZNF592Q92610 1267 aa7.72□□□□□ -1.17
TMEM116-211ENST00000550233 RBM47A0AV96 593 aaKnown RBP7.71□□□□□ -1.18
TMEM116-211ENST00000550233 CFAP99D6REC4 459 aa7.71□□□□□ -1.18
TMEM116-211ENST00000550233 IGSF3O75054 1194 aa7.71□□□□□ -1.18
TMEM116-211ENST00000550233 LHX6Q9UPM6 363 aa7.71□□□□□ -1.18
TMEM116-211ENST00000550233 C3orf80F5H4A9 247 aa7.7□□□□□ -1.18
TMEM116-211ENST00000550233 NR1H3Q13133 447 aa7.7□□□□□ -1.18
TMEM116-211ENST00000550233 CDCA8Q53HL2 280 aa7.7□□□□□ -1.18
TMEM116-211ENST00000550233 DESI1Q6ICB0 168 aa7.7□□□□□ -1.18
TMEM116-211ENST00000550233 TBC1D9Q6ZT07 1266 aa7.7□□□□□ -1.18
TMEM116-211ENST00000550233 HS3ST6Q96QI5 342 aa7.7□□□□□ -1.18
TMEM116-211ENST00000550233 CARNS1A5YM72 827 aa7.69□□□□□ -1.18
TMEM116-211ENST00000550233 HOXB3P14651 431 aaPredicted RBP7.69□□□□□ -1.18
TMEM116-211ENST00000550233 ARID4AP29374 1257 aaPredicted RBP7.69□□□□□ -1.18
TMEM116-211ENST00000550233 KHSRPQ92945 711 aaKnown RBP eCLIP7.69□□□□□ -1.182e-7■□□□□ 9.6
TMEM116-211ENST00000550233 SLC10A3P09131 477 aa7.68□□□□□ -1.18
TMEM116-211ENST00000550233 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
TMEM116-211ENST00000550233 GUCA2AQ02747 115 aa7.68□□□□□ -1.18
TMEM116-211ENST00000550233 NR6A1Q15406 480 aa7.68□□□□□ -1.18
TMEM116-211ENST00000550233 KANK4Q5T7N3 995 aaPredicted RBP7.68□□□□□ -1.18
TMEM116-211ENST00000550233 TXNDC2Q86VQ3 553 aa7.68□□□□□ -1.18
TMEM116-211ENST00000550233 PLEKHM2Q8IWE5 1019 aa7.68□□□□□ -1.18
TMEM116-211ENST00000550233 LOC105371045A0A1W2PR82 267 aa7.67□□□□□ -1.18
TMEM116-211ENST00000550233 SMAPO00193 183 aa7.67□□□□□ -1.18
TMEM116-211ENST00000550233 Q3C1V9 767 aa7.67□□□□□ -1.18
TMEM116-211ENST00000550233 SWT1Q5T5J6 900 aaKnown RBP7.67□□□□□ -1.18
TMEM116-211ENST00000550233 RETREG3Q86VR2 466 aa7.67□□□□□ -1.18
TMEM116-211ENST00000550233 EPS8L1Q8TE68 723 aa7.67□□□□□ -1.18
TMEM116-211ENST00000550233 ZC3H4Q9UPT8 1303 aaKnown RBP7.67□□□□□ -1.18
TMEM116-211ENST00000550233 FAM196BA6NMK8 535 aa7.66□□□□□ -1.18
TMEM116-211ENST00000550233 LZTS3O60299 673 aaPredicted RBP7.66□□□□□ -1.18
TMEM116-211ENST00000550233 KIAA1468Q9P260 1216 aa7.66□□□□□ -1.18
TMEM116-211ENST00000550233 ZBBXA8MT70 800 aa7.65□□□□□ -1.18
TMEM116-211ENST00000550233 HMGB1P09429 215 aaKnown RBP7.65□□□□□ -1.18
TMEM116-211ENST00000550233 MCCD1P59942 119 aaPredicted RBP7.65□□□□□ -1.18
TMEM116-211ENST00000550233 FUT2Q10981 343 aa7.65□□□□□ -1.18
TMEM116-211ENST00000550233 TMEM164Q5U3C3 297 aa7.65□□□□□ -1.18
TMEM116-211ENST00000550233 HLA-CQ95604 372 aa7.65□□□□□ -1.18
TMEM116-211ENST00000550233 NOVA2Q9UNW9 492 aaKnown RBP7.65□□□□□ -1.18
TMEM116-211ENST00000550233 ERBB3P21860 1342 aa7.64□□□□□ -1.19
TMEM116-211ENST00000550233 USP17L3A6NCW0 530 aa7.64□□□□□ -1.19
TMEM116-211ENST00000550233 USP17L4A6NCW7 530 aa7.64□□□□□ -1.19
TMEM116-211ENST00000550233 PROX2Q3B8N5 592 aa7.64□□□□□ -1.19
TMEM116-211ENST00000550233 USP17L2Q6R6M4 530 aa7.64□□□□□ -1.19
TMEM116-211ENST00000550233 USP17L1Q7RTZ2 530 aa7.64□□□□□ -1.19
TMEM116-211ENST00000550233 RABGEF1Q9UJ41 708 aa7.64□□□□□ -1.19
TMEM116-211ENST00000550233 KMT5BQ4FZB7 885 aa7.63□□□□□ -1.19
TMEM116-211ENST00000550233 LARP1Q6PKG0 1096 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms