RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
DEPDC4-205ENST00000548313 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
DEPDC4-205ENST00000548313 SPSB2Q99619 263 aa9.23□□□□□ -0.93
DEPDC4-205ENST00000548313 RPIAP49247 311 aa9.22□□□□□ -0.93
DEPDC4-205ENST00000548313 DDRGK1Q96HY6 314 aa9.22□□□□□ -0.93
DEPDC4-205ENST00000548313 DDX11L8A8MPP1 907 aa9.21□□□□□ -0.94
DEPDC4-205ENST00000548313 ST8SIA5O15466 376 aa9.21□□□□□ -0.94
DEPDC4-205ENST00000548313 FOXC1Q12948 553 aa9.21□□□□□ -0.94
DEPDC4-205ENST00000548313 MS4A1P11836 297 aa9.2□□□□□ -0.94
DEPDC4-205ENST00000548313 CD46P15529 392 aa9.2□□□□□ -0.94
DEPDC4-205ENST00000548313 CRIPAKQ8N1N5 446 aa9.2□□□□□ -0.94
DEPDC4-205ENST00000548313 PKD2L1Q9P0L9 805 aa9.2□□□□□ -0.94
DEPDC4-205ENST00000548313 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-205ENST00000548313 PUS10Q3MIT2 529 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-205ENST00000548313 RDH13Q8NBN7 331 aa9.18□□□□□ -0.94
DEPDC4-205ENST00000548313 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
DEPDC4-205ENST00000548313 BEGAINQ9BUH8 593 aa9.17□□□□□ -0.94
DEPDC4-205ENST00000548313 FAM117AQ9C073 453 aa9.17□□□□□ -0.94
DEPDC4-205ENST00000548313 AVPP01185 164 aa9.16□□□□□ -0.94
DEPDC4-205ENST00000548313 GCGRP47871 477 aa9.16□□□□□ -0.94
DEPDC4-205ENST00000548313 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
DEPDC4-205ENST00000548313 CYP4X1Q8N118 509 aa9.16□□□□□ -0.94
DEPDC4-205ENST00000548313 CTC1Q2NKJ3 1217 aa9.15□□□□□ -0.94
DEPDC4-205ENST00000548313 TOR4AQ9NXH8 423 aa9.15□□□□□ -0.94
DEPDC4-205ENST00000548313 AXIN1O15169 862 aa9.14□□□□□ -0.95
DEPDC4-205ENST00000548313 TMEM132AQ24JP5 1023 aa9.14□□□□□ -0.95
DEPDC4-205ENST00000548313 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
DEPDC4-205ENST00000548313 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
DEPDC4-205ENST00000548313 FMNL1O95466 1100 aaPredicted RBP9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 USP46P62068 366 aa9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 MORN1Q5T089 497 aa9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 NUTM1Q86Y26 1132 aa9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
DEPDC4-205ENST00000548313 PLEKHG3A1L390 1219 aa9.12□□□□□ -0.95
DEPDC4-205ENST00000548313 KDM4AO75164 1064 aa9.12□□□□□ -0.95
DEPDC4-205ENST00000548313 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
DEPDC4-205ENST00000548313 THAP11Q96EK4 314 aa9.12□□□□□ -0.95
DEPDC4-205ENST00000548313 C11orf95C9JLR9 678 aaPredicted RBP9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 WFS1O76024 890 aa9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 GRIPAP1Q4V328 841 aa9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 GOPCQ9HD26 462 aa9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 SALL2Q9Y467 1007 aaPredicted RBP9.11□□□□□ -0.95
DEPDC4-205ENST00000548313 ZBTB24O43167 697 aaPredicted RBP9.1□□□□□ -0.95
DEPDC4-205ENST00000548313 SPIRE2Q8WWL2 714 aa9.1□□□□□ -0.95
DEPDC4-205ENST00000548313 GMPR2Q9P2T1 348 aaKnown RBP9.1□□□□□ -0.95
DEPDC4-205ENST00000548313 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
DEPDC4-205ENST00000548313 FUT2Q10981 343 aa9.09□□□□□ -0.95
DEPDC4-205ENST00000548313 FAM160A2Q8N612 972 aaPredicted RBP9.09□□□□□ -0.95
DEPDC4-205ENST00000548313 TBC1D2Q9BYX2 928 aa9.09□□□□□ -0.95
DEPDC4-205ENST00000548313 TTC24A2A3L6 582 aaPredicted RBP9.08□□□□□ -0.96
DEPDC4-205ENST00000548313 GJA5P36382 358 aa9.08□□□□□ -0.96
DEPDC4-205ENST00000548313 SH3D19Q5HYK7 790 aa9.08□□□□□ -0.96
DEPDC4-205ENST00000548313 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
DEPDC4-205ENST00000548313 SKIV2LQ15477 1246 aaKnown RBP9.07□□□□□ -0.96
DEPDC4-205ENST00000548313 STK17AQ9UEE5 414 aa9.06□□□□□ -0.96
DEPDC4-205ENST00000548313 HOXA2O43364 376 aa9.05□□□□□ -0.96
DEPDC4-205ENST00000548313 MSS51Q4VC12 460 aa9.05□□□□□ -0.96
DEPDC4-205ENST00000548313 MYSM1Q5VVJ2 828 aa9.05□□□□□ -0.96
DEPDC4-205ENST00000548313 BRICD5Q6PL45 260 aa9.05□□□□□ -0.96
DEPDC4-205ENST00000548313 WNT7AO00755 349 aa9.04□□□□□ -0.96
DEPDC4-205ENST00000548313 INSM1Q01101 510 aaPredicted RBP9.04□□□□□ -0.96
DEPDC4-205ENST00000548313 TUSC1Q2TAM9 212 aa9.04□□□□□ -0.96
DEPDC4-205ENST00000548313 SNIP1Q8TAD8 396 aaKnown RBP9.04□□□□□ -0.96
DEPDC4-205ENST00000548313 SPTLC1O15269 473 aa9.03□□□□□ -0.96
DEPDC4-205ENST00000548313 WIPF1O43516 503 aa9.03□□□□□ -0.96
DEPDC4-205ENST00000548313 NFX1Q12986 1120 aaKnown RBP9.03□□□□□ -0.96
DEPDC4-205ENST00000548313 RIC3Q7Z5B4 369 aa9.03□□□□□ -0.96
DEPDC4-205ENST00000548313 MOXD2PA6NHM9 499 aa9.02□□□□□ -0.97
DEPDC4-205ENST00000548313 RSBN1LQ6PCB5 846 aaPredicted RBP9.02□□□□□ -0.97
DEPDC4-205ENST00000548313 PCMTD1Q96MG8 357 aaPredicted RBP9.02□□□□□ -0.97
DEPDC4-205ENST00000548313 PRDM9Q9NQV7 894 aa9.02□□□□□ -0.97
DEPDC4-205ENST00000548313 CLK2P49760 499 aaKnown RBP9.01□□□□□ -0.97
DEPDC4-205ENST00000548313 SENP2Q9HC62 589 aa9.01□□□□□ -0.97
DEPDC4-205ENST00000548313 POLR3EQ9NVU0 708 aa9.01□□□□□ -0.97
DEPDC4-205ENST00000548313 FDX1P10109 184 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 SMPD1P17405 629 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 NDUFV2P19404 249 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 Q3C1V9 767 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 ATP13A2Q9NQ11 1180 aa9□□□□□ -0.97
DEPDC4-205ENST00000548313 TRIM32Q13049 653 aa8.98□□□□□ -0.97
DEPDC4-205ENST00000548313 PRPF38BQ5VTL8 546 aaKnown RBP8.98□□□□□ -0.97
DEPDC4-205ENST00000548313 RNF19BQ6ZMZ0 732 aa8.98□□□□□ -0.97
DEPDC4-205ENST00000548313 LIMD1Q9UGP4 676 aa8.98□□□□□ -0.97
DEPDC4-205ENST00000548313 MMP16P51512 607 aa8.97□□□□□ -0.97
DEPDC4-205ENST00000548313 TRIM47Q96LD4 638 aa8.97□□□□□ -0.97
DEPDC4-205ENST00000548313 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.97□□□□□ -0.97
DEPDC4-205ENST00000548313 ATP1B4Q9UN42 357 aaPredicted RBP8.97□□□□□ -0.97
DEPDC4-205ENST00000548313 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 TERTO14746 1132 aaKnown RBP8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 PROCA1Q8NCQ7 364 aaPredicted RBP8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 MRGPRX2Q96LB1 330 aa8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.98
DEPDC4-205ENST00000548313 HLA-CQ95604 372 aa8.95□□□□□ -0.98
DEPDC4-205ENST00000548313 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
DEPDC4-205ENST00000548313 PCDHB15Q9Y5E8 787 aa8.95□□□□□ -0.98
DEPDC4-205ENST00000548313 J3QL48 77 aa8.94□□□□□ -0.98
DEPDC4-205ENST00000548313 LILRB3O75022 631 aa8.94□□□□□ -0.98
DEPDC4-205ENST00000548313 SNRPBP14678 240 aaKnown RBP8.94□□□□□ -0.98
DEPDC4-205ENST00000548313 GUCA2AQ02747 115 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms