RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 COL25A1Q9BXS0 654 aaPredicted RBP3.72□□□□□ -1.81
COPB1-212ENST00000534771 PHF20L1A8MW92 1017 aa3.71□□□□□ -1.82
COPB1-212ENST00000534771 STK25O00506 426 aa3.71□□□□□ -1.82
COPB1-212ENST00000534771 EPAS1Q99814 870 aa3.71□□□□□ -1.82
COPB1-212ENST00000534771 SEMA6BQ9H3T3 888 aa3.71□□□□□ -1.82
COPB1-212ENST00000534771 ZFP64Q9NPA5 681 aa3.71□□□□□ -1.82
COPB1-212ENST00000534771 NBPF26B4DH59 902 aa3.7□□□□□ -1.82
COPB1-212ENST00000534771 ZBTB24O43167 697 aaPredicted RBP3.7□□□□□ -1.82
COPB1-212ENST00000534771 NUDT18Q6ZVK8 323 aa3.7□□□□□ -1.82
COPB1-212ENST00000534771 FCF1Q9Y324 198 aaKnown RBP3.7□□□□□ -1.82
COPB1-212ENST00000534771 TXKP42681 527 aa3.69□□□□□ -1.82
COPB1-212ENST00000534771 SLC4A3P48751 1232 aa3.68□□□□□ -1.82
COPB1-212ENST00000534771 PRSS12P56730 875 aa3.68□□□□□ -1.82
COPB1-212ENST00000534771 RNFT1Q5M7Z0 435 aa3.68□□□□□ -1.82
COPB1-212ENST00000534771 IFNLR1Q8IU57 520 aaPredicted RBP3.68□□□□□ -1.82
COPB1-212ENST00000534771 ALDH1A1P00352 501 aa3.67□□□□□ -1.82
COPB1-212ENST00000534771 ARTNQ5T4W7 220 aa3.67□□□□□ -1.82
COPB1-212ENST00000534771 BEND7Q8N7W2 519 aaPredicted RBP3.67□□□□□ -1.82
COPB1-212ENST00000534771 TAOK2Q9UL54 1235 aa3.67□□□□□ -1.82
COPB1-212ENST00000534771 NR1I2O75469 434 aa3.66□□□□□ -1.82
COPB1-212ENST00000534771 TSR1Q2NL82 804 aaKnown RBP3.66□□□□□ -1.82
COPB1-212ENST00000534771 LYPD4Q6UWN0 246 aa3.66□□□□□ -1.82
COPB1-212ENST00000534771 SPSB2Q99619 263 aa3.66□□□□□ -1.82
COPB1-212ENST00000534771 KRBA1A5PL33 1030 aa3.65□□□□□ -1.83
COPB1-212ENST00000534771 MAP3K10Q02779 954 aa3.65□□□□□ -1.83
COPB1-212ENST00000534771 FOXD4L6Q3SYB3 417 aaPredicted RBP3.65□□□□□ -1.83
COPB1-212ENST00000534771 FOXD4L3Q6VB84 417 aaPredicted RBP3.65□□□□□ -1.83
COPB1-212ENST00000534771 PURBQ96QR8 312 aaKnown RBP3.65□□□□□ -1.83
COPB1-212ENST00000534771 MAN1A2O60476 641 aa3.64□□□□□ -1.83
COPB1-212ENST00000534771 SCARF1Q14162 830 aa3.64□□□□□ -1.83
COPB1-212ENST00000534771 SCUBE3Q8IX30 993 aa3.64□□□□□ -1.83
COPB1-212ENST00000534771 ACTN4O43707 911 aaKnown RBP3.63□□□□□ -1.83
COPB1-212ENST00000534771 ENAMQ9NRM1 1142 aa3.63□□□□□ -1.83
COPB1-212ENST00000534771 PAX4O43316 350 aa3.62□□□□□ -1.83
COPB1-212ENST00000534771 MAP3K7O43318 606 aa3.62□□□□□ -1.83
COPB1-212ENST00000534771 PODNQ7Z5L7 613 aa3.62□□□□□ -1.83
COPB1-212ENST00000534771 REPIN1Q9BWE0 567 aaKnown RBP3.62□□□□□ -1.83
COPB1-212ENST00000534771 CRISPLD2Q9H0B8 497 aa3.62□□□□□ -1.83
COPB1-212ENST00000534771 RC3H1Q5TC82 1133 aaKnown RBP3.61□□□□□ -1.83
COPB1-212ENST00000534771 MRPL14Q6P1L8 145 aaKnown RBP3.61□□□□□ -1.83
COPB1-212ENST00000534771 CCER1Q8TC90 406 aaPredicted RBP3.61□□□□□ -1.83
COPB1-212ENST00000534771 CELA2BP08218 269 aaPredicted RBP3.6□□□□□ -1.83
COPB1-212ENST00000534771 TRIM32Q13049 653 aa3.6□□□□□ -1.83
COPB1-212ENST00000534771 KMT5BQ4FZB7 885 aa3.6□□□□□ -1.83
COPB1-212ENST00000534771 DDX12PQ92771 950 aa3.6□□□□□ -1.83
COPB1-212ENST00000534771 EMILIN3Q9NT22 766 aa3.6□□□□□ -1.83
COPB1-212ENST00000534771 ADAMTS2O95450 1211 aa3.59□□□□□ -1.83
COPB1-212ENST00000534771 MCTP1Q6DN14 999 aa3.59□□□□□ -1.83
COPB1-212ENST00000534771 WASF2Q9Y6W5 498 aa3.59□□□□□ -1.83
COPB1-212ENST00000534771 DOC2BQ14184 412 aa3.58□□□□□ -1.84
COPB1-212ENST00000534771 EN1Q05925 392 aaPredicted RBP3.57□□□□□ -1.84
COPB1-212ENST00000534771 NEDD1Q8NHV4 660 aa3.57□□□□□ -1.84
COPB1-212ENST00000534771 PDE4AP27815 886 aa3.56□□□□□ -1.84
COPB1-212ENST00000534771 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
COPB1-212ENST00000534771 FMNL2Q96PY5 1086 aa3.56□□□□□ -1.84
COPB1-212ENST00000534771 CFHP08603 1231 aa3.55□□□□□ -1.84
COPB1-212ENST00000534771 PUS10Q3MIT2 529 aaKnown RBP3.55□□□□□ -1.84
COPB1-212ENST00000534771 CERKQ8TCT0 537 aa3.55□□□□□ -1.84
COPB1-212ENST00000534771 NBR1Q14596 966 aa3.54□□□□□ -1.84
COPB1-212ENST00000534771 VWA5B2Q8N398 1253 aa3.54□□□□□ -1.84
COPB1-212ENST00000534771 FAM160A2Q8N612 972 aaPredicted RBP3.54□□□□□ -1.84
COPB1-212ENST00000534771 NANOS1Q8WY41 292 aaKnown RBP3.54□□□□□ -1.84
COPB1-212ENST00000534771 NCKAP5LQ9HCH0 1330 aa3.53□□□□□ -1.84
COPB1-212ENST00000534771 C1QTNF9BB2RNN3 333 aa3.53□□□□□ -1.84
COPB1-212ENST00000534771 SKOR1P84550 965 aa3.52□□□□□ -1.85
COPB1-212ENST00000534771 C6orf118Q5T5N4 469 aa3.52□□□□□ -1.85
COPB1-212ENST00000534771 SH3RF1Q7Z6J0 888 aa3.52□□□□□ -1.85
COPB1-212ENST00000534771 LARP6Q9BRS8 491 aaKnown RBP3.52□□□□□ -1.85
COPB1-212ENST00000534771 PRDM9Q9NQV7 894 aa3.52□□□□□ -1.85
COPB1-212ENST00000534771 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
COPB1-212ENST00000534771 DDX27Q96GQ7 796 aaKnown RBP3.51□□□□□ -1.85
COPB1-212ENST00000534771 COL17A1Q9UMD9 1497 aaPredicted RBP3.5□□□□□ -1.85
COPB1-212ENST00000534771 CDC14CA4D256 554 aa3.5□□□□□ -1.85
COPB1-212ENST00000534771 SIAH2O43255 324 aa3.5□□□□□ -1.85
COPB1-212ENST00000534771 HYAL3O43820 417 aaPredicted RBP3.5□□□□□ -1.85
COPB1-212ENST00000534771 COL8A1P27658 744 aa3.5□□□□□ -1.85
COPB1-212ENST00000534771 SRSF11Q05519 484 aaKnown RBP3.5□□□□□ -1.85
COPB1-212ENST00000534771 SV2AQ7L0J3 742 aa3.5□□□□□ -1.85
COPB1-212ENST00000534771 CD163Q86VB7 1156 aa3.49□□□□□ -1.85
COPB1-212ENST00000534771 EYA1Q99502 592 aa3.49□□□□□ -1.85
COPB1-212ENST00000534771 ECM2O94769 699 aaPredicted RBP3.48□□□□□ -1.85
COPB1-212ENST00000534771 FECHP22830 423 aa3.48□□□□□ -1.85
COPB1-212ENST00000534771 PTSQ03393 145 aa3.48□□□□□ -1.85
COPB1-212ENST00000534771 DNMT3LQ9UJW3 386 aa3.48□□□□□ -1.85
COPB1-212ENST00000534771 WNT7BP56706 349 aa3.47□□□□□ -1.85
COPB1-212ENST00000534771 ALYREFQ86V81 257 aaKnown RBP3.47□□□□□ -1.85
COPB1-212ENST00000534771 CCDC155Q8N6L0 562 aa3.47□□□□□ -1.85
COPB1-212ENST00000534771 BCRP11274 1271 aa3.46□□□□□ -1.86
COPB1-212ENST00000534771 SNRPNP63162 240 aaKnown RBP3.46□□□□□ -1.86
COPB1-212ENST00000534771 JAG1P78504 1218 aa3.46□□□□□ -1.86
COPB1-212ENST00000534771 LRP8Q14114 963 aa3.46□□□□□ -1.86
COPB1-212ENST00000534771 EHBP1Q8NDI1 1231 aa3.46□□□□□ -1.86
COPB1-212ENST00000534771 THAP11Q96EK4 314 aa3.46□□□□□ -1.86
COPB1-212ENST00000534771 FMNL1O95466 1100 aaPredicted RBP3.45□□□□□ -1.86
COPB1-212ENST00000534771 SLC10A3P09131 477 aa3.45□□□□□ -1.86
COPB1-212ENST00000534771 BMP2P12643 396 aa3.45□□□□□ -1.86
COPB1-212ENST00000534771 TIMP2P16035 220 aa3.45□□□□□ -1.86
COPB1-212ENST00000534771 WDR4P57081 412 aaKnown RBP3.45□□□□□ -1.86
COPB1-212ENST00000534771 GRIN2CQ14957 1233 aa3.45□□□□□ -1.86
COPB1-212ENST00000534771 DPYSL4O14531 572 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms