RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 CABLES1Q8TDN4 633 aa6.49□□□□□ -1.37
C11orf54-213ENST00000533585 TRIM34Q9BYJ4 488 aa6.49□□□□□ -1.37
C11orf54-213ENST00000533585 HMX1Q9NP08 348 aaPredicted RBP6.49□□□□□ -1.37
C11orf54-213ENST00000533585 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
C11orf54-213ENST00000533585 PHF14O94880 888 aa6.48□□□□□ -1.37
C11orf54-213ENST00000533585 PRPF38BQ5VTL8 546 aaKnown RBP6.48□□□□□ -1.37
C11orf54-213ENST00000533585 DPY19L2Q6NUT2 758 aa6.48□□□□□ -1.37
C11orf54-213ENST00000533585 CD46P15529 392 aa6.47□□□□□ -1.37
C11orf54-213ENST00000533585 PADI6Q6TGC4 694 aa6.47□□□□□ -1.37
C11orf54-213ENST00000533585 MICAL1Q8TDZ2 1067 aa6.47□□□□□ -1.37
C11orf54-213ENST00000533585 ZNF526Q8TF50 670 aaPredicted RBP6.47□□□□□ -1.37
C11orf54-213ENST00000533585 BRPF3Q9ULD4 1205 aa6.47□□□□□ -1.37
C11orf54-213ENST00000533585 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.47□□□□□ -1.37
C11orf54-213ENST00000533585 CLSTN1O94985 981 aa6.46□□□□□ -1.38
C11orf54-213ENST00000533585 C7P10643 843 aa6.46□□□□□ -1.38
C11orf54-213ENST00000533585 TAGLNQ01995 201 aaKnown RBP6.46□□□□□ -1.38
C11orf54-213ENST00000533585 CTDSPL2Q05D32 466 aa6.46□□□□□ -1.38
C11orf54-213ENST00000533585 TAF7LQ5H9L4 462 aa6.46□□□□□ -1.38
C11orf54-213ENST00000533585 FBXO33Q7Z6M2 555 aa6.46□□□□□ -1.38
C11orf54-213ENST00000533585 TICAM2Q86XR7 235 aa6.46□□□□□ -1.38
C11orf54-213ENST00000533585 PNMA1Q8ND90 353 aa6.46□□□□□ -1.38
C11orf54-213ENST00000533585 DNAJC2Q99543 621 aaKnown RBP6.46□□□□□ -1.38
C11orf54-213ENST00000533585 TANGO6Q9C0B7 1094 aa6.46□□□□□ -1.38
C11orf54-213ENST00000533585 ZBTB3Q9H5J0 574 aa6.46□□□□□ -1.38
C11orf54-213ENST00000533585 PLEKHD1A6NEE1 506 aa6.45□□□□□ -1.38
C11orf54-213ENST00000533585 ATP2B4P23634 1241 aa6.45□□□□□ -1.38
C11orf54-213ENST00000533585 EIF4G2P78344 907 aaKnown RBP eCLIP6.45□□□□□ -1.38
C11orf54-213ENST00000533585 RBM46Q8TBY0 533 aaKnown RBP6.45□□□□□ -1.38
C11orf54-213ENST00000533585 CLP1Q92989 425 aaKnown RBP6.45□□□□□ -1.38
C11orf54-213ENST00000533585 RAB11FIP3O75154 756 aa6.44□□□□□ -1.38
C11orf54-213ENST00000533585 SULF1Q8IWU6 871 aa6.44□□□□□ -1.38
C11orf54-213ENST00000533585 PIK3R5Q8WYR1 880 aa6.44□□□□□ -1.38
C11orf54-213ENST00000533585 LNPKQ9C0E8 428 aa6.44□□□□□ -1.38
C11orf54-213ENST00000533585 CUEDC1Q9NWM3 386 aaPredicted RBP6.44□□□□□ -1.38
C11orf54-213ENST00000533585 SLAIN2Q9P270 581 aa6.44□□□□□ -1.38
C11orf54-213ENST00000533585 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.44□□□□□ -1.38
C11orf54-213ENST00000533585 TLDC2A0PJX2 215 aa6.43□□□□□ -1.38
C11orf54-213ENST00000533585 G3V3G9 751 aa6.43□□□□□ -1.38
C11orf54-213ENST00000533585 SCAMP3O14828 347 aaKnown RBP6.43□□□□□ -1.38
C11orf54-213ENST00000533585 FOSBP53539 338 aa6.43□□□□□ -1.38
C11orf54-213ENST00000533585 SLAIN1Q8ND83 568 aa6.43□□□□□ -1.38
C11orf54-213ENST00000533585 HELBQ8NG08 1087 aaPredicted RBP6.43□□□□□ -1.38
C11orf54-213ENST00000533585 FAM200AQ8TCP9 573 aa6.43□□□□□ -1.38
C11orf54-213ENST00000533585 CERKQ8TCT0 537 aa6.43□□□□□ -1.38
C11orf54-213ENST00000533585 BCCIPQ9P287 314 aaKnown RBP eCLIP6.43□□□□□ -1.38
C11orf54-213ENST00000533585 RIPOR2Q9Y4F9 1068 aa6.43□□□□□ -1.38
C11orf54-213ENST00000533585 PPME1Q9Y570 386 aa6.43□□□□□ -1.38
C11orf54-213ENST00000533585 SBNO2Q9Y2G9 1366 aa6.43□□□□□ -1.38
C11orf54-213ENST00000533585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.42□□□□□ -1.38
C11orf54-213ENST00000533585 LOC102724159A0A0B4J2E5 919 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L3A6NCW0 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L4A6NCW7 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 FAM196BA6NMK8 535 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L15C9J2P7 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L10C9JJH3 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L13C9JLJ4 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L12C9JPN9 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L11C9JVI0 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L21D6R901 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L18D6R9N7 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L22D6RA61 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L17D6RBQ6 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L19D6RCP7 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L20D6RJB6 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 LZTS3O60299 673 aaPredicted RBP6.42□□□□□ -1.38
C11orf54-213ENST00000533585 MAPK1P28482 360 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 HDLBPQ00341 1268 aaKnown RBP6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L24Q0WX57 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 PWP2Q15269 919 aaKnown RBP6.42□□□□□ -1.38
C11orf54-213ENST00000533585 C9orf131Q5VYM1 1079 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 LARP1Q6PKG0 1096 aaKnown RBP6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L2Q6R6M4 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 USP17L1Q7RTZ2 530 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 LRRN4Q8WUT4 740 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 TSC1Q92574 1164 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 BACH2Q9BYV9 841 aa6.42□□□□□ -1.38
C11orf54-213ENST00000533585 ANO8Q9HCE9 1232 aaPredicted RBP6.42□□□□□ -1.38
C11orf54-213ENST00000533585 DDX11L8A8MPP1 907 aa6.41□□□□□ -1.38
C11orf54-213ENST00000533585 ABL1P00519 1130 aa6.41□□□□□ -1.38
C11orf54-213ENST00000533585 PRKAR2AP13861 404 aaKnown RBP6.41□□□□□ -1.38
C11orf54-213ENST00000533585 EAPPQ56P03 285 aaPredicted RBP6.41□□□□□ -1.38
C11orf54-213ENST00000533585 TYW1BQ6NUM6 668 aa6.41□□□□□ -1.38
C11orf54-213ENST00000533585 ZSCAN29Q8IWY8 852 aaPredicted RBP6.41□□□□□ -1.38
C11orf54-213ENST00000533585 CDCA7Q9BWT1 371 aaPredicted RBP6.41□□□□□ -1.38
C11orf54-213ENST00000533585 MYH16Q9H6N6 1097 aa6.41□□□□□ -1.38
C11orf54-213ENST00000533585 METTL14Q9HCE5 456 aaKnown RBP6.41□□□□□ -1.38
C11orf54-213ENST00000533585 SKIP12755 728 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 ATP2B1P20020 1258 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 IGBP1P78318 339 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 FAM69CQ0P6D2 419 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 CRTC2Q53ET0 693 aaPredicted RBP6.4□□□□□ -1.38
C11orf54-213ENST00000533585 TMED8Q6PL24 325 aaPredicted RBP6.4□□□□□ -1.38
C11orf54-213ENST00000533585 NFATC2IPQ8NCF5 419 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 DHX38Q92620 1227 aaKnown RBP6.4□□□□□ -1.38
C11orf54-213ENST00000533585 ASB16Q96NS5 453 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 PHF12Q96QT6 1004 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 TMEM121BQ9BXQ6 578 aaPredicted RBP6.4□□□□□ -1.38
C11orf54-213ENST00000533585 PRKAG2Q9UGJ0 569 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 EGFL7Q9UHF1 273 aa6.4□□□□□ -1.38
C11orf54-213ENST00000533585 TRPC6Q9Y210 931 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms